Protein

View in Explore
Genbank accession
YP_009622136.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MASESDYDWGDDFLDGDMDFDFDFDGNKNQGFLKSVSKGFLSALKSNTVGDTDAKVKTLRRILPSSFGTTFDFYRELDRKKREAFKEFKENSSELMGDLAFLSGSLSTSLRDRLPNKIVDGLEEFSKKDFSDWEKPSDGIEDRFQMEAVEESEQQRMLDALEQQSIVHVESTDAITRVMSTVGSRQLSAGLQGNEQLFEVNANLQRLYQYQMKVHGQREAMKLNLMTRQYLTSAKYYKFMEASQHRLIREMKDIVKNTAMSDFEKTSVLQASKGRIRDNILKSTFSRTGGFGEAIGSLVSKDGINDGLGVLTQLVGDARFATEMSQDSGISTGELVGSMLGQFVVERGPEFFDTKMGRDLLNRVRSKYPDQAKLFDKTQKELRQFGDLLSYSTKAMGSVMGRHYQETGMMDQLPETYEEYLESLPADAKPMPKLLWQTVRKATGAAGTAFNLVGENYMESQGSVYQIKEKSLKSLKDNSVWSVHDSRSLTEEIPTLLSEIHHTLEKIRTGNDDVPKLRYDYRTSRATTTDHLNDQVQRIITPEWELNSYSDAAKSIVRDIDTKGELSESASNALAHRLAREADKGNVFNVYDYIGAQTDEYMDREQADEIEALIRRRFSITDDLVERTQESSLDGLMARLTVPTAEGQELLHRLSLRTDSLKNYTPNIAEKIDLVRSLGLDEGLKASGLISVDPETNKEYINQELIWQQLQNKLAGKSPNASLNKSSNEPYPTRDDLNTIFRQNNNSVLDSFNLSNPSPLPLQEEVHGTLTNIMNAVVKIKENTSGLTSLPNFGDNGKGLTIDPLLELVKTGNMSLAEISQSQLEQISILKRLKSVSTVGVDPDAPTGEVTEEQRSEEREKRSLIDRLRSIVPSDAFNQGIEALIANKPMVLGGLIGGLGMTAFSNPKAAALLAGGATVATLYGKLNSLAPKGQELKEDEDLYDENGEEILYASKKNAGDYYDQASKKIIRSWKDIKGTVIDISQGTSEVAASAKRLAGKVFGPDGREIILDGIHRLQSFVGKTFRAIDPMGKVRDAIDKVKTSVDQMDVYLRGDSEPVLTSRGFKNGWYFDEEGNEILGWRDILGPVFDQDGNMLVSTQDLNNGLLTIGGVSINKLTNIGNRIGSGIGKGAEWLKNNGREKLGSAILGQDVSINRNTPDRYEPITTRLDSIYSLIAGHWGLDTKMPGVEKVSPKVRNYMNNVAAGEHEDEKPTEGIRLNSLADKIRRKKEAKQAQFQDSVIDIAESLNPDDKDGKEKKGGGLLGRLLGFAGGGIFALMKQFFSLGIGGFKNLIKLNGTLTKGLFSLGKILSGALLGRRAKDGVDDLIGGADADGKDRRKGKGKRGRFGRFSKLGRMGNMAKFGVGGALMLGGDMAIDAARDGFGVEEGSTADKLLDVGSMGLNAAGWLATGSAVAGMAGTSLGGIAAASAPFLLNPITLGVAGAGLAGYAAYKYFTASELTIQQKLRMAQYGIDDQDEDLINTIIQLERNLQDYIQVSGTNTGFSRETPLERFIGPLIQTRSGREGVRDTLHWFSARFKPVYLSYHAQFRKLNIVKFEDYDQLKNNTVALIAKKAHEEAAMFNPSPYRIQVWISDDTYAMSEEQTKAQVARYLNELKEEYDTVNLNSDKLSEDLTIDTVNSKIKKVEKAGMLESVWMRMTGDHNDEEKQKKLDTWFKKPEVIKGIDISDMLPGDKPVALITAFRLTAYGNEENMPWRVEAVLKLERWIEKYTSYSNGRSEFTGSVEEFWATFSTSFRVTSKRGRELAIRWFQYRFLPVWLAWHQVCRNQRGGDPSKVWMTLSATAQFRFAQQVTELKVMIDKRVKTLFSVDEAPFEGERSEGMTTRVKRLVQALEVKANQARLKDPEMEQRRTVRTPEGTDQSVYRLPDNLNINKPRNPQDISKQFGVEQPTPRDQVTSDLSKVKVDTNRKLETDITLKPGDDKGISLNKDQITKVLIQEMVKKGYDDPREIAQMLALTDYETGGYKSTAENMRYTNASRARSIFRKLKKFNIPQIQDIIRQGPVAFANAVYNGWLGNTDSPNDGWLYRGRGLVQLTGKDNYERAAEDLGIDIVNNPRLVSEDPEVMAKTAIWFLENSPQMQSIKQHGDFTFSARGLNGGKALPGMDKRERLYNDYLKGILNGDLTKDLAPSEEDNSPYDPSSGMSETEKHIDNYVNNHMTKSEMDDRVEQRIAEKSKQYKNGVLVDNKFTRGNSLASSVPKGMLVKEERALTSPKPGQSYSLDDQTSKATSAVKATRTMSPPPAIARPESTPTAPKSEGGSKEVIKQQIDEKLKEIRVTADELKVDVSMRPETEAILAGQIKLLEGILNAINEGNNKIDRRRQDSVMMS
Physico‐chemical
properties
protein length:2351 AA
molecular weight: 261928,46150 Da
isoelectric point:5,86836
aromaticity:0,07188
hydropathy:-0,56848

Domains

Domains [InterPro]
DC_0124
STR
1–2219
DC_0124 Coil
Coil
Unmapped
1614–1634
Coil G3DSA:1.10.530.10
IPR023346
STR
1962–2139
IPR023346
PTHR22595
Unmapped
1969–2139
PTHR22595
IPR000726
ENZ
2046–2097
IPR000726
YP_009622136.1
1 2351
Architecture
STR
STR 1-2219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Aphrodite1
[NCBI] 		2070057 Uroviricota > Caudoviricetes > Chimalliviridae > Aphroditevirus > Aphroditevirus aphrodite1
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009622136.1 [NCBI]
Genbank nucleotide accession
NC_042100.1 [NCBI]
CDS location
range 7000 -> 14055
strand -
CDS
ATGGCAAGTGAATCAGATTATGATTGGGGAGATGATTTCCTAGATGGAGACATGGACTTTGATTTTGACTTTGATGGAAATAAAAATCAAGGTTTCCTGAAATCGGTCTCCAAGGGATTTCTTTCTGCCCTAAAATCTAATACCGTCGGTGATACCGACGCAAAAGTTAAAACATTAAGACGCATTCTTCCTAGTTCTTTCGGCACCACCTTTGACTTCTACCGAGAGCTAGATCGTAAGAAACGAGAAGCGTTCAAAGAATTCAAAGAGAACAGCTCAGAACTCATGGGAGATCTGGCTTTTCTTTCTGGTTCTTTAAGCACCTCCTTGCGTGACCGTCTACCCAATAAAATCGTGGATGGGTTAGAAGAATTCAGCAAGAAAGATTTCAGCGATTGGGAGAAACCGTCGGATGGTATCGAAGATCGTTTCCAAATGGAAGCGGTTGAAGAAAGCGAACAACAACGTATGTTGGATGCTTTGGAACAACAAAGTATTGTCCACGTAGAATCTACTGACGCCATCACCCGAGTGATGAGTACCGTAGGGTCTAGGCAGTTGTCGGCGGGCTTACAAGGCAACGAACAGTTATTCGAAGTCAACGCTAACTTACAACGCCTATACCAATATCAGATGAAAGTTCATGGTCAACGAGAAGCCATGAAACTTAACCTGATGACTCGTCAGTATTTAACTTCGGCTAAATACTACAAATTCATGGAAGCTTCCCAACACCGCTTAATCCGTGAAATGAAAGACATTGTTAAAAACACCGCGATGTCTGATTTTGAAAAGACGAGTGTGCTGCAAGCGAGTAAAGGCCGAATCAGAGATAACATTCTTAAGTCCACGTTTTCTCGTACTGGTGGTTTTGGTGAAGCCATTGGTAGTCTGGTTAGTAAAGATGGGATTAATGACGGACTGGGTGTTCTTACTCAACTTGTTGGTGATGCGAGATTCGCCACGGAGATGAGTCAAGATTCGGGAATAAGTACCGGGGAGCTCGTTGGCTCTATGCTTGGTCAGTTCGTTGTAGAACGTGGGCCTGAGTTCTTTGATACTAAGATGGGACGTGACCTCCTTAACCGAGTCCGCAGCAAATACCCAGACCAAGCAAAACTTTTTGACAAGACCCAAAAAGAGTTACGCCAGTTTGGTGATTTGTTGTCTTACTCCACTAAGGCGATGGGTTCGGTTATGGGTCGTCATTATCAGGAAACTGGTATGATGGACCAACTCCCTGAAACGTACGAAGAGTATTTGGAGTCATTACCAGCTGATGCAAAACCGATGCCTAAATTATTATGGCAAACGGTGAGAAAGGCAACAGGAGCCGCAGGTACCGCTTTCAACCTTGTCGGTGAGAACTACATGGAGTCTCAGGGTAGTGTTTATCAAATCAAAGAGAAATCTTTGAAATCCCTAAAAGACAACTCCGTGTGGTCCGTCCATGACTCTCGCAGTTTAACTGAAGAAATCCCAACGTTGTTAAGTGAGATTCATCACACCCTTGAAAAGATTCGCACAGGTAATGATGATGTTCCTAAGTTACGTTACGACTACCGTACTTCTCGTGCAACCACGACTGATCACCTGAACGACCAAGTTCAACGCATCATTACACCAGAATGGGAACTGAATTCTTATTCGGATGCAGCTAAGTCTATCGTTCGTGATATTGACACTAAAGGAGAGTTAAGTGAATCGGCGTCTAACGCTCTAGCTCATCGACTAGCTAGAGAAGCGGACAAAGGTAACGTCTTTAACGTTTATGACTACATTGGGGCTCAAACCGATGAGTACATGGATCGTGAACAAGCCGATGAAATCGAAGCATTGATTCGTCGTCGCTTTAGCATTACAGACGATCTGGTCGAACGCACCCAAGAAAGTAGCTTAGACGGACTTATGGCCCGTCTAACCGTCCCTACTGCTGAAGGACAAGAGTTACTGCATCGTCTCTCTTTACGTACGGACTCTCTTAAAAACTACACACCTAACATCGCTGAGAAGATCGACCTAGTTCGCAGTCTTGGTTTGGATGAAGGGTTAAAGGCTTCTGGTCTTATTAGTGTGGATCCTGAGACGAACAAAGAGTACATTAACCAAGAACTTATTTGGCAACAACTACAAAACAAGCTAGCAGGTAAGTCTCCTAATGCTTCTTTAAATAAAAGCAGTAATGAACCTTATCCTACTAGAGATGATCTTAACACTATATTTAGGCAAAATAATAATAGTGTCTTAGACTCATTTAACTTATCCAATCCTTCCCCCCTTCCCTTGCAGGAAGAAGTTCACGGTACACTCACCAATATCATGAACGCCGTAGTAAAAATTAAAGAGAACACTTCCGGGTTAACCTCTTTACCTAACTTCGGAGATAATGGGAAAGGACTTACGATTGATCCGTTATTGGAATTGGTAAAAACCGGTAACATGTCTTTGGCTGAAATCAGTCAGTCACAATTAGAGCAAATCTCTATCTTAAAACGTCTCAAATCGGTTTCTACGGTTGGAGTTGATCCCGACGCACCTACCGGTGAAGTGACAGAAGAACAACGTTCAGAAGAACGTGAGAAGCGTTCCTTAATAGACCGTCTTCGTTCCATCGTCCCGTCCGATGCCTTCAACCAAGGTATTGAAGCGTTAATTGCGAACAAACCTATGGTGTTGGGTGGTTTGATCGGTGGGTTGGGGATGACTGCTTTCTCTAATCCTAAGGCGGCAGCTTTACTGGCGGGTGGTGCAACCGTCGCTACGTTGTACGGTAAGCTTAACTCTTTGGCACCAAAGGGTCAAGAACTTAAGGAAGACGAAGACCTTTACGACGAAAACGGTGAAGAAATTCTTTATGCTTCTAAGAAGAACGCCGGGGATTACTATGACCAAGCGTCTAAGAAAATCATTCGTTCTTGGAAAGACATCAAGGGAACAGTAATTGATATCTCCCAAGGTACTTCTGAAGTCGCTGCTAGTGCTAAGCGTTTGGCTGGGAAAGTGTTCGGTCCAGACGGTCGAGAGATCATACTGGACGGTATACATCGACTCCAGTCGTTTGTCGGTAAAACCTTCCGTGCTATTGACCCAATGGGTAAAGTCCGTGATGCGATTGATAAGGTCAAAACCAGTGTCGACCAGATGGACGTTTACCTGAGAGGGGATTCCGAGCCAGTACTAACTTCCCGTGGGTTTAAGAATGGTTGGTATTTTGACGAAGAAGGTAATGAGATCTTAGGCTGGCGGGATATCCTTGGACCTGTCTTTGACCAAGATGGTAACATGTTGGTTTCTACTCAAGACCTCAATAACGGACTATTGACCATTGGTGGTGTTTCGATTAACAAACTGACTAACATCGGTAATCGGATCGGCAGTGGGATAGGTAAAGGTGCAGAATGGTTAAAGAACAATGGTAGGGAGAAACTCGGGTCTGCCATTTTAGGACAAGATGTTTCTATCAACCGCAACACCCCTGATCGTTATGAACCAATCACTACCCGTCTTGATTCTATCTATTCACTCATTGCTGGACATTGGGGGTTAGATACCAAAATGCCGGGGGTGGAGAAAGTCAGTCCTAAAGTCCGTAACTACATGAACAATGTTGCGGCGGGCGAACATGAGGATGAGAAACCTACTGAGGGGATTCGTCTGAACTCACTGGCTGACAAAATCCGTAGAAAGAAAGAAGCGAAACAAGCTCAATTCCAAGACTCGGTAATTGACATTGCGGAATCCTTGAACCCGGACGATAAAGACGGAAAAGAGAAAAAAGGAGGTGGACTACTGGGACGACTGTTAGGGTTTGCGGGCGGAGGAATCTTCGCATTAATGAAGCAATTCTTCAGCCTAGGTATCGGTGGGTTTAAGAACCTAATAAAGCTTAATGGTACGTTGACCAAAGGTTTGTTCAGCTTAGGGAAAATCCTATCAGGCGCGTTACTGGGCCGTCGAGCTAAAGATGGCGTGGACGATCTAATTGGTGGTGCAGATGCCGACGGTAAAGATCGTCGCAAAGGTAAAGGTAAGCGTGGACGTTTCGGTCGTTTCTCTAAACTAGGCCGTATGGGTAATATGGCTAAGTTTGGTGTAGGTGGTGCGTTGATGCTCGGTGGTGACATGGCTATCGATGCAGCACGTGATGGGTTTGGTGTTGAAGAAGGCTCGACTGCGGATAAACTGTTGGACGTAGGTTCAATGGGATTAAATGCGGCGGGTTGGTTAGCAACAGGCTCAGCGGTTGCAGGGATGGCAGGAACGTCACTGGGTGGAATTGCAGCAGCGTCTGCTCCGTTTCTGTTAAACCCAATTACCTTGGGGGTAGCGGGTGCAGGTTTAGCGGGCTACGCTGCATACAAATACTTCACCGCAAGCGAACTAACTATCCAGCAGAAACTCCGTATGGCACAATACGGTATCGATGATCAAGATGAAGATTTAATCAACACGATTATTCAGCTTGAGCGAAACCTACAAGACTATATCCAAGTTTCTGGTACCAATACAGGGTTCTCTAGAGAAACCCCGTTAGAACGCTTCATAGGTCCCTTAATTCAAACACGTTCAGGTCGGGAAGGAGTTAGGGATACATTGCATTGGTTTAGTGCTCGATTTAAACCTGTGTACCTGAGTTACCACGCTCAATTCCGAAAACTTAATATCGTTAAGTTTGAAGATTACGACCAGCTTAAAAATAACACGGTGGCTTTGATTGCTAAGAAAGCGCACGAAGAAGCCGCGATGTTTAACCCGTCCCCTTACCGTATTCAGGTTTGGATTAGTGACGATACGTACGCCATGAGTGAGGAACAAACCAAAGCCCAAGTCGCACGTTATCTAAACGAACTCAAAGAAGAATACGATACGGTTAACCTTAATTCAGATAAACTGTCTGAAGACCTAACGATCGACACGGTAAACTCCAAGATCAAGAAAGTCGAAAAGGCTGGGATGCTGGAAAGCGTTTGGATGCGGATGACTGGGGATCATAACGATGAAGAGAAGCAGAAAAAACTCGATACGTGGTTTAAGAAACCAGAAGTAATTAAGGGGATCGATATCTCCGACATGCTTCCGGGGGATAAACCTGTAGCACTGATAACTGCTTTCCGACTTACTGCTTACGGTAATGAAGAAAACATGCCATGGCGTGTTGAAGCGGTTCTTAAGTTAGAGCGTTGGATTGAGAAATACACTTCTTATTCTAATGGTCGTTCCGAGTTTACTGGAAGTGTGGAAGAATTCTGGGCAACGTTCAGTACGTCTTTCCGTGTGACGTCTAAGCGTGGTCGAGAACTCGCCATCCGTTGGTTCCAGTACCGTTTCCTTCCAGTCTGGTTAGCTTGGCATCAGGTGTGTCGTAACCAGCGTGGTGGTGATCCATCTAAAGTCTGGATGACGTTATCGGCGACAGCTCAATTCCGTTTTGCTCAACAAGTCACTGAACTTAAGGTGATGATTGACAAAAGAGTGAAGACTTTGTTCAGCGTTGATGAAGCGCCGTTCGAAGGCGAACGTTCAGAAGGAATGACGACCCGTGTTAAGCGTCTAGTTCAGGCCCTTGAAGTTAAAGCGAATCAAGCTAGACTGAAAGACCCTGAGATGGAGCAACGTCGTACGGTTCGAACCCCAGAGGGGACAGACCAGTCAGTGTACCGACTCCCTGATAATCTGAACATCAACAAACCGAGAAACCCTCAAGATATTTCTAAACAGTTTGGTGTAGAACAACCTACTCCGCGTGATCAAGTCACTAGTGATTTGAGTAAAGTGAAAGTAGATACCAACCGTAAATTAGAAACTGATATCACCCTCAAACCGGGGGACGATAAAGGCATCTCATTAAACAAAGATCAGATCACTAAGGTGTTGATCCAAGAGATGGTTAAGAAGGGTTACGATGACCCTAGGGAAATCGCTCAGATGTTGGCGTTGACCGATTATGAGACGGGTGGTTACAAATCTACTGCTGAGAACATGCGTTACACTAATGCGTCACGAGCGCGCTCTATCTTCCGTAAATTGAAGAAGTTCAATATCCCGCAAATACAAGACATCATTCGTCAAGGACCGGTGGCTTTCGCTAATGCTGTATATAACGGCTGGCTAGGTAATACGGATTCTCCTAACGACGGTTGGTTGTACCGTGGTCGTGGGTTGGTTCAATTAACGGGTAAAGATAATTACGAGCGGGCAGCAGAAGATCTAGGAATTGATATTGTCAATAATCCTAGATTGGTTTCTGAAGACCCAGAGGTCATGGCTAAGACTGCTATCTGGTTCCTAGAAAACTCACCACAAATGCAGTCGATCAAACAACACGGGGACTTCACGTTCTCTGCACGTGGTTTGAATGGCGGTAAAGCCCTACCGGGAATGGATAAACGTGAGCGTCTGTACAACGACTACCTAAAAGGTATTCTTAACGGAGATCTCACAAAAGACCTAGCTCCGTCAGAAGAAGATAATTCCCCTTACGACCCAAGTTCGGGGATGTCTGAAACCGAGAAACACATCGACAACTATGTCAATAATCACATGACTAAGTCTGAGATGGATGATCGGGTTGAACAACGTATTGCAGAAAAATCAAAGCAATACAAGAACGGAGTTTTAGTCGACAACAAATTCACTCGCGGTAATTCCTTGGCTTCCTCTGTTCCCAAGGGAATGTTGGTTAAAGAAGAGCGCGCGTTAACGTCCCCTAAACCGGGGCAGTCTTACTCGTTAGACGATCAAACGTCTAAGGCGACGTCTGCGGTTAAAGCAACACGCACTATGAGTCCACCTCCAGCGATTGCTAGACCGGAATCAACTCCAACCGCCCCTAAGTCAGAGGGAGGAAGTAAGGAGGTCATTAAACAGCAAATCGACGAGAAACTGAAGGAGATCAGAGTAACCGCTGATGAACTGAAAGTGGACGTTTCGATGCGACCAGAAACCGAAGCCATCTTAGCCGGTCAAATTAAGTTGCTGGAAGGCATACTAAATGCAATCAACGAAGGCAACAACAAGATCGACCGAAGAAGACAAGACTCGGTCATGATGTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
56dddb4167a3e731914148ff2c2e2161f9dd3cc7fe8ff012d9b42def6ff6adaf
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage resistance in Vibrio sp. unravels a complex metabolic adaptation strategy Skliros,D., Kalatzis,P.G., Katharios,P. and Flemetakis,E. 2021-04-10 — GenBank