Protein

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Genbank accession
AXH68355.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFTTINKSTLHHNTKLFTGTGSNGNAITGVGFKPDLVWLKNRSGATAHVLVDALRGNNKVLNPDGTTAETTTNANKDFKSFDSDGFTVDTNENFGSTNTNGANIASWNWKGANSSGSANSDGSINSTVSANTTAGFSIVQFVGNSTSGATVGHGLGVAPKVVIIKSRDTAYSWRSYHASLGATKYIELDATGGYTTATNFMNNTAPTSSVFSLGNGDTPNKNGDNYIAYCFAEIKGYSKFGMYKGNSSLMGNTTHAPFIYTGFKPTTVIIKGTASSRDWYIWNNKNLGYNMENNELYPSDAGAEGTANKIGLMSNGFKLNHSGTGVNNNNEDYLYFAWGQSIVGSNNVPCTAR
Physico‐chemical
properties
protein length:354 AA
molecular weight: 37580,77960 Da
isoelectric point:8,64149
aromaticity:0,10734
hydropathy:-0,43136

Domains

Domains [InterPro]
IPR055906
STR
9–340
IPR055906
AXH68355.1
1 354
Architecture
STR
STR 9-340 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH68355.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0042
Central domain 11 209 200 0,0006
C-terminal 210 354 144 0,9996
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC021P
[NCBI] 		2282994 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH68355.1 [NCBI]
Genbank nucleotide accession
MH579717.1 [NCBI]
CDS location
range 35605 -> 36669
strand +
CDS
ATGGCTTTTACTACAATTAATAAATCTACACTCCACCATAATACTAAACTTTTTACTGGTACTGGTTCTAATGGAAATGCTATTACAGGTGTGGGATTTAAACCTGACCTTGTCTGGTTAAAGAACAGAAGTGGTGCAACAGCTCATGTTTTAGTAGATGCTCTTAGAGGAAATAATAAAGTATTAAACCCAGATGGTACTACAGCAGAAACAACAACAAACGCAAATAAAGATTTTAAAAGTTTTGATAGTGATGGTTTTACTGTTGATACAAATGAAAATTTTGGTTCAACTAATACTAATGGTGCTAATATTGCATCTTGGAATTGGAAAGGTGCAAATTCTTCTGGCTCAGCTAATTCAGATGGTTCTATAAATTCTACTGTATCTGCAAACACAACAGCAGGGTTTAGTATAGTACAATTCGTTGGAAATTCTACAAGTGGTGCAACAGTAGGTCATGGATTAGGAGTTGCTCCTAAAGTAGTAATAATTAAAAGTAGAGATACTGCATATAGTTGGAGAAGTTATCATGCATCATTAGGTGCTACAAAATATATAGAATTAGATGCTACTGGGGGATATACAACAGCAACAAATTTTATGAATAATACAGCTCCAACATCTTCTGTATTTTCATTAGGTAATGGAGATACTCCAAATAAAAATGGAGATAACTATATAGCTTATTGTTTTGCAGAAATAAAAGGTTACAGCAAGTTTGGTATGTATAAAGGAAATTCATCTTTAATGGGTAATACTACTCATGCACCATTTATTTATACAGGATTTAAACCAACAACAGTTATTATAAAAGGAACTGCATCAAGTAGAGATTGGTATATTTGGAACAATAAAAATTTAGGATATAACATGGAAAATAACGAATTATATCCATCCGATGCGGGTGCAGAGGGAACTGCTAATAAAATTGGTTTAATGAGTAATGGTTTTAAACTTAATCATAGTGGAACTGGTGTAAATAATAATAACGAAGACTATTTATATTTTGCATGGGGTCAATCTATAGTAGGTTCAAACAATGTTCCATGTACAGCGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ccdc5cc825e39793ce8fad335630c5c2678dbe36e4557fabc55dd01bf4023b0c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50