Protein

View in Explore
Genbank accession
YAF79204.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTEQIDNIALREALKKMFSVGTHSLQFTKKDGTVREMIATRDPALMPFETYEKWLVPNVEKPRKESETSLPVYEIAVEGFRSFGLDSLINVDGLTPAQIVEIYK
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11849,51010 Da
isoelectric point:5,16726
aromaticity:0,08654
hydropathy:-0,27885

Domains

Domains [InterPro]
IPR024401
STR
12–89
IPR024401
YAF79204.1
1 104
Architecture
STR
STR 12-89 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ETE131P06
[NCBI] 		3459904 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF79204.1 [NCBI]
Genbank nucleotide accession
PX104378.1 [NCBI]
CDS location
range 44895 -> 45209
strand -
CDS
ATGACCGAACAAATTGATAATATCGCACTTCGTGAAGCACTAAAGAAAATGTTTTCGGTCGGTACTCACTCTTTGCAGTTTACTAAGAAAGATGGTACTGTCCGCGAGATGATCGCTACGAGAGATCCGGCACTGATGCCGTTTGAAACATACGAAAAGTGGTTAGTTCCGAATGTTGAAAAACCGCGTAAAGAATCAGAAACATCTTTGCCAGTATATGAAATTGCAGTTGAAGGTTTCCGTAGTTTTGGGCTTGATAGTCTGATTAATGTAGACGGGCTGACTCCAGCGCAGATCGTCGAAATTTATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d659a5c5e3096424452e55d2f04082448a767cd416dc897fad00b80c00658801
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A machine learning approach to predict strain-specific phage-host interactions Camejo,P.Y., Leon,L.E., Rojas,F., Ossa,A., Hurtado,R., Tichy,D., Pieringer,C., Pino,M., Mora-Uribe,P., Ulloa,S., Norambuena,R., Tobar-Calfucoy,E., Aguilera,M., Rojas-Martinez,V., Cifuentes,O., Sabag,A., Cifuentes,N., San Martin,D., Infante,C., Cifuentes,P. and Pieringer,H. — — GenBank