Protein

View in Explore
Genbank accession
YP_009275285.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MLHGENYRTPYGPNNPERIPLDKVNDYKLEDYGLTVENVKANHFGVEITDPRTGQHLPDAFYRAKIEDAVAKVEKQLDIVILPRIVREYHDYNRMDYNSHTYLHTFQKPIVQVESIALQYSGHSVFRYPSRWWRVYHLYGHLQMLPALMLSGEQGNLSLAQSYSGFPMIAGVPPSMSNTSMPQLFQVDYVAGMLPPSRRGVSQPWEMHPDLWDLIVKHALKEVFQQWGRLIIGPGIAGMTMQIDGVSQSIDTTQSAMYGGASAEIIQLDNDIKELTNGLKSYYGQNLGIV
Physico‐chemical
properties
protein length:290 AA
molecular weight: 32943,10730 Da
isoelectric point:5,98011
aromaticity:0,10345
hydropathy:-0,35448

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Shbh1
[NCBI] 		1796992 Uroviricota > Caudoviricetes > Herelleviridae > Shalavirus > Shalavirus Shbh1
Host Bacillus sp.
[NCBI] 		1409 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009275285.1 [NCBI]
Genbank nucleotide accession
NC_030925.1 [NCBI]
CDS location
range 67581 -> 68453
strand +
CDS
ATGTTACATGGCGAGAACTATAGAACCCCTTACGGACCTAATAATCCTGAACGTATACCTTTAGACAAGGTGAACGATTATAAATTGGAAGATTACGGTCTAACAGTTGAGAATGTTAAAGCTAACCATTTTGGTGTAGAAATTACCGACCCTCGGACAGGTCAACACTTACCCGATGCTTTCTATCGAGCAAAGATAGAGGACGCTGTAGCGAAAGTAGAAAAGCAGTTAGATATTGTAATTCTTCCGAGAATAGTTAGAGAGTACCATGATTATAATCGTATGGATTATAACAGTCATACATATCTACACACATTCCAAAAACCCATCGTTCAGGTGGAGTCGATTGCCTTACAATATAGTGGGCATAGTGTATTTAGGTACCCTTCTAGATGGTGGAGAGTTTACCATTTGTATGGTCATCTTCAAATGTTGCCTGCCCTAATGCTGTCTGGAGAACAAGGAAATCTAAGTTTGGCTCAATCTTATTCTGGATTTCCTATGATTGCCGGAGTTCCTCCTAGTATGAGTAATACATCTATGCCTCAACTTTTCCAAGTTGATTATGTAGCAGGCATGCTACCTCCAAGTAGAAGAGGAGTTAGCCAACCTTGGGAGATGCACCCTGATTTATGGGACCTTATTGTTAAGCACGCTCTAAAAGAAGTATTTCAGCAATGGGGGCGACTGATTATTGGTCCGGGTATTGCAGGCATGACTATGCAAATAGACGGAGTTTCACAAAGTATCGATACGACTCAATCTGCTATGTATGGTGGAGCCTCTGCTGAAATAATTCAGCTAGATAATGACATTAAAGAACTTACGAATGGTTTAAAATCCTACTACGGACAAAATTTAGGTATTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46b828eda7fff89012a91b8277eb9af223c468f2dcc4eeb2885231a6d8bef596
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7587
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophages from East Africa Rift Valley soda lakes van Zyl,L.J., Nemavhulani,S., Cowan,D.A. and Trindade,M.I. 2016-12 — GenBank