Protein

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Genbank accession
WNA16193.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MFPIPIISSLRVQPSNPGIKTLTTGPEAKSVVLQYNSGETYALGANTSGMYGTGTTTDITGNWALLRNDVRLFACCGNFSILITKDNKVYGSGSLNTIFTSALGYSISNSTTYQDITSAFSRFDISAIQAIQGYNDTPARLFVVDGSGQIWGIGSNQYYALGAGSGTGTYNWTALTSGTNVKKIQCTLYGTWILKNDGTAWRCGTNSVATLGFGSKTSTQTTFGQYTPGTGLTVLDVGAGQYNCTLLLSDGTIRTCGASYGTGNGTTTGQLAFYNPGLSAINRISSMNFYSTFVIGASQMMSTGDNNSGRLAISTSTSPTNFVACAGTVQSQTLSSITYMCNIVNASYYVYQGLVYAAGGAAMTLGTTNTPVYRLMPTPYK
Physico‐chemical
properties
protein length:381 AA
molecular weight: 40107,50410 Da
isoelectric point:8,80182
aromaticity:0,10761
hydropathy:-0,00525

Domains

Domains [InterPro]
IPR009091
STR
8–325
IPR009091
IPR009091
STR
30–110
IPR009091 IPR009091
IPR051553
Unmapped
143–321
IPR051553
WNA16193.1
1 381
Architecture
STR
STR 8-363 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNA16193.1
1 381
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,8969
Central domain 16 224 210 0,5293
C-terminal 225 381 156 0,5671
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-224
C-terminal
225-381

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XaC1
[NCBI] 		3073039 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNA16193.1 [NCBI]
Genbank nucleotide accession
OR258281 [NCBI]
CDS location
range 347415 -> 348560
strand -
CDS
ATGTTTCCGATTCCGATTATAAGTTCACTTAGGGTACAGCCTAGTAATCCGGGAATAAAGACTTTAACTACTGGCCCGGAGGCAAAGAGTGTAGTACTGCAATATAATTCAGGCGAGACTTATGCATTGGGTGCAAACACGAGTGGGATGTACGGTACAGGTACAACTACAGACATTACAGGAAATTGGGCGTTATTACGTAATGATGTACGTTTATTTGCATGTTGTGGTAATTTCAGTATATTGATTACTAAGGATAACAAGGTATATGGTTCAGGTTCATTGAACACGATATTCACTTCTGCGTTAGGATATTCTATATCTAACAGTACTACCTATCAGGATATTACTTCTGCATTTTCTCGTTTTGACATTAGTGCTATACAGGCTATACAGGGATATAATGATACGCCAGCTAGGTTATTTGTAGTTGATGGTTCAGGTCAGATATGGGGAATAGGCAGTAATCAGTACTATGCATTAGGTGCTGGTAGTGGTACTGGAACATATAACTGGACAGCATTAACGAGTGGTACAAACGTTAAGAAGATCCAGTGCACGTTATATGGTACATGGATATTAAAGAATGATGGTACTGCGTGGCGATGTGGTACAAACAGTGTAGCAACATTAGGATTTGGTTCAAAGACTTCTACTCAGACTACATTTGGTCAGTACACGCCGGGTACGGGATTAACGGTACTAGATGTTGGTGCGGGGCAGTATAACTGTACATTACTTTTAAGTGACGGAACAATAAGAACATGTGGTGCAAGTTACGGTACAGGTAATGGTACTACAACTGGACAGTTAGCATTTTACAATCCAGGGTTGAGTGCAATTAACCGTATAAGTTCTATGAATTTCTACAGTACTTTTGTTATTGGTGCTTCACAGATGATGAGTACTGGGGACAACAACTCCGGTCGTCTTGCTATAAGTACTTCTACTTCGCCCACTAACTTTGTTGCATGTGCTGGTACAGTACAGTCACAGACGTTGAGTTCGATAACATACATGTGTAACATAGTGAACGCATCGTATTATGTATATCAGGGATTAGTATATGCAGCGGGTGGTGCGGCTATGACACTTGGTACTACAAATACTCCTGTTTACAGATTAATGCCTACACCATACAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2a31f0dd9868ef7a7a2f0c813c9f95b0453e868f45b36eb8571e23a08614987
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8882
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi,L.M., Villicana,M.C., Amarillas,L.A., Carrillo,A. and Leon,J. 2014-03-01 — GenBank