Protein

View in Explore
Genbank accession
UJD05652.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIRVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGGMEPRYLMDMVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNADAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASASLTGKIGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVSIITDQILDEILDSDAMKELQESAQDSASKLNDYANSIIQNALANDADVRVMRKENGKRKAEISHTTVLIANETEARAAEITQLKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMEAGFTQVNEAIANESEARATSEAALDAKIGENSAALAQKLDSWANVDGVGSMYTMKLGLTYNGQEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGQYIQSNNFISGQQGWSINKSGASEFNNVVVRGALFAASGNFGFDGGNGVVINGNGVTVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126797,19140 Da
isoelectric point:4,60648
aromaticity:0,09391
hydropathy:-0,27513

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–868
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–713
IPR036116
UJD05652.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05652.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,9068
Central domain 501 1080 581 0,0614
C-terminal 1081 1150 69 0,6227
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1080
C-terminal
1081-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp17
[NCBI] 		2863267 No lineage information
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05652.1 [NCBI]
Genbank nucleotide accession
MZ634348.1 [NCBI]
CDS location
range 8512 -> 11964
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTACTGGCTGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGAGTTATTGCAGAATTTCGCCCCGGCACGCAAACACAGAGTTACATCCAGGGCTTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACTCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACTTGACCGACAAAATCGACGGTAAAAACACGACTGGTGGTTACGATCGCAGCATCCGCGTCAACTTGCCGCAAGACTTCACTTCGCAGGTTCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTATCCGGGTTCCGAGTAACTACGACCCTGTTAACAGGACGTATGCCGGAACGTGGGACGGAACTTTCAAATGGGCATGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAACGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGTCGCAATACTGTGACGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATATGGTCGTGCAGTCGCAGGTCGAAGCCTTCCAGTTGGTCAGGGATGTTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGATAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGATGGCGTATTCGTGCGAACTTTTCCGAGCGAAAAAACGATGTACACGTCGTGCAACGTGATGTTCGACGACGAAGAGAACCAGTACGAACAGGACGTTGAACCAGTATTCAACGCTGACGCTGCAATGCGGTTCGGTCACAACCCGACAAGCATCACGGCGATCGGTTGCACCAGACGGACAGAAGCAAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGCCTGGAAGGCATGATCCCGTCATGCGGAGATGTGATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTTTCGGGGCGAATCATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAACACTGACGACGGTAAGCCATTGCGCCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCCATTACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACCGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGGATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGAAACTGGAACAACGTGCCGCGCACTGCGACAACGCAGGTTGACATTGAAGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGTAATATCGCGTCTCCGTGGTCTGCTTTGGCTAGTGCATCGCTGACCGGGAAAATTGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCTATGCCTGAAGGTGCAGAGGATACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTCTGATTCCTTACCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTTAACTGGTACAAGGCGCGAAGCGTCGACAGGATCGGCAACGTTTCACCCTGGACTGATTACGCTCGCGGTATGTCATCGACTGACGTTAGCATCATCACAGATCAGATTCTGGATGAAATTCTGGATAGCGATGCCATGAAGGAGTTGCAGGAGAGCGCACAGGACAGCGCTTCTAAACTCAACGACTACGCGAACAGCATCATTCAGAACGCGTTAGCCAACGATGCAGACGTCAGAGTTATGCGCAAGGAGAACGGCAAGCGGAAGGCGGAAATCTCGCATACCACTGTGCTGATCGCCAACGAGACTGAAGCGAGGGCGGCTGAGATCACACAGCTTAAAACGCAGATTGATGAGGATATCACGTCACAGATTACGATCCTGAACGAAGCGCTGGCAGATGAAAGCGAAACGCGAGCAACCCAAATTAACCAGTTGCAAACACAATTTGGGGAGGATATGGAAGCAGGGTTTACGCAGGTTAACGAGGCGATCGCAAACGAAAGTGAAGCGCGCGCAACGTCCGAGGCAGCGTTAGATGCCAAAATCGGCGAGAACTCCGCAGCGCTGGCGCAAAAGCTGGATTCGTGGGCCAATGTTGATGGCGTAGGTTCCATGTACACAATGAAGTTAGGGCTAACGTACAATGGACAGGAATATAATTCCGGGATGGCGTTACAGCTTACCGCACAAGGAAACAACGTTGTTTCGCAAGTGCTGTTTATTGCCGATAGATTTGCTATCATCCGCAATGCGGCATCCGGCGCTTACACGCTTCCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCGCTTATTCAGGATGGTTCGATTACCAACGCCAAGATCGGACAGTATATCCAGTCCAACAACTTCATTTCGGGCCAGCAGGGGTGGAGCATCAACAAATCCGGTGCGTCTGAATTCAATAATGTTGTCGTTCGTGGCGCGCTGTTTGCTGCGTCTGGTAACTTCGGATTTGATGGCGGAAACGGTGTGGTAATCAACGGTAACGGCGTCACCGTCAACCTTGACGGCGGCGGGCGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de16abcf7d292437052fb4ff73f0e396c0495b2de184e19998c248b6333c168f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank