Protein

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Genbank accession
ARB12239.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNNIEATEVKYGVTGNVVSFSQFTNWRLVDVNSAVTINNTSVEDGYNSGIGIEGGGNHFIGFTIIGDGFNDQGLNRFHFIYNGEFNISNVISYNGLGDFLVVSSLAGGDTGTQSKWSRLLNCEVGDLGGRIMKADYVSNLQVEINAIKCGRLLGGAAPLVQITNCDAIDIHPNFDQFYDMPSVWREVIEVVDSSRVNIHQGTIVSIPAANNLFSMIAFKGNSQRCNVAPLSSNIAGHAKMYIFPVSSEATCSAISVIGGSFVEGAFISGTPDLKGVGDSYTAVNIGASNVSDSPRASLSLSNTNTPVVTFKEQHILKENVSASGAPLLSIDFLDAGKTHCADIEVSIAASTVTGIGSYFGKFKIRFIRSIDGSGRANISPAIDAYSDGSVSTISISVTETHTQYGIVLGVLPTFGGTSAESLCNISANVKANSMYRINMHQ
Physico‐chemical
properties
protein length:441 AA
molecular weight: 46726,84300 Da
isoelectric point:5,16191
aromaticity:0,08390
hydropathy:0,09093

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARB12239.1
1 441
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0049
Central domain 11 287 278 0,9631
C-terminal 288 441 153 0,9763
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-287
C-terminal
288-441

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST-W77
[NCBI] 		1897742 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB12239.1 [NCBI]
Genbank nucleotide accession
KX765865.1 [NCBI]
CDS location
range 64376 -> 65701
strand -
CDS
ATGAATAATATTGAAGCGACTGAAGTAAAATACGGTGTAACGGGTAACGTAGTTAGCTTTTCTCAGTTTACTAACTGGAGACTCGTTGACGTCAATTCAGCGGTAACTATTAACAATACCAGTGTTGAGGACGGATATAACTCGGGCATTGGTATTGAGGGTGGCGGAAACCACTTCATCGGTTTCACTATTATCGGTGATGGTTTCAATGACCAGGGATTAAACCGGTTCCACTTCATCTATAATGGCGAGTTCAACATCTCAAACGTTATCAGTTATAACGGTCTTGGTGATTTCCTGGTTGTAAGCTCGCTGGCGGGTGGCGATACCGGAACTCAATCTAAATGGTCGCGACTGCTGAACTGTGAAGTAGGAGACCTTGGTGGCAGAATCATGAAGGCCGATTATGTAAGTAACTTGCAGGTCGAGATTAATGCCATCAAGTGCGGAAGGTTGCTGGGTGGTGCAGCTCCATTGGTGCAGATAACAAACTGTGATGCTATCGATATCCACCCTAATTTTGACCAGTTCTATGATATGCCCTCTGTATGGCGTGAAGTCATTGAGGTTGTTGATAGCTCACGTGTAAATATCCACCAGGGAACAATCGTCTCTATCCCGGCGGCGAACAACCTCTTTAGCATGATCGCGTTTAAGGGTAACAGCCAGCGATGCAACGTCGCACCGCTATCCTCTAATATCGCTGGTCACGCCAAGATGTATATCTTCCCTGTGTCATCTGAGGCCACCTGCTCAGCGATTTCGGTAATCGGCGGCTCTTTTGTGGAAGGTGCTTTCATTTCAGGAACCCCAGACCTTAAGGGGGTGGGGGATTCTTACACTGCCGTTAATATTGGGGCAAGTAATGTTAGTGATTCTCCAAGAGCATCATTAAGCCTTTCAAATACAAATACCCCAGTTGTAACTTTTAAAGAACAGCATATTTTAAAAGAAAACGTGTCGGCTTCTGGTGCTCCTCTATTATCAATTGATTTTTTGGACGCTGGAAAAACTCATTGCGCGGATATTGAGGTTAGTATTGCAGCATCAACGGTAACAGGTATTGGTTCTTACTTTGGTAAATTTAAGATAAGATTTATCCGCAGCATTGATGGTAGCGGTAGGGCTAACATTTCTCCAGCTATTGATGCATACTCTGATGGGTCAGTTTCTACTATTAGTATATCTGTTACCGAGACACATACTCAGTATGGTATTGTGCTAGGTGTTTTACCTACATTTGGTGGGACGTCAGCGGAATCTCTCTGCAATATCTCTGCAAATGTAAAAGCAAATAGCATGTACCGTATAAATATGCACCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
70a556a82275e23c4d2f315a119aaaabeb3eb25ae615dbb3d66be50588b6e99c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages ST-W77 which highly virulent against several Salmonella enteritica subsp. Typhimurium Korbsrisate,S. and Supokaivanich,R. 2011-07-26 — GenBank