Protein

View in Explore
Genbank accession
QIW87629.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MITTICPSVPCPTNEGTPLPPASVVVCGCGSGGGGGEQGPRGYSAYEVAVMNGFVGTEAEWLASLEGQPGPQGIQGDIGPQGPAGADGADGPAGADGDSAYQVAVDNGFVGTEAEWLASLVGPEGPQGIQGIQGPAGADGPQGPEGPQGIQGVAGPEGPQGEQGPVGATGPQGGGLVPDEYGDLTDAKVTEIETADVDWVFLVNPDGDLRSNQTIPAGISGDMERHLIMYHADTDTWSDYGQFTGVEGPQGPQGIQGPAGAAGPQGEDGPQGPQGVQGPAGADGPQGEQGPQGIQGIQGEQGPQGPAGVVPLTEIVTVPDALYSFLLTGAEKYHRFTNAAAKTVIVPTNATVAFPFAAGGTTTIAFINAGDGLLTISPAAGVTINKRADQTLTLTKFATAVLTKVGADEWDLSGDMEPM
Physico‐chemical
properties
protein length:419 AA
molecular weight: 41713,29010 Da
isoelectric point:4,05003
aromaticity:0,05489
hydropathy:-0,23341

Domains

Domains [InterPro]
DC_1473
STR
10–93
DC_1473 IPR008160 IPR008160
IPR050149
Unmapped
33–308
IPR050149
G3DSA:1.20.5.320
STR
67–118
G3DSA:1.20.5.320 G3DSA:1.20.5.320
DC_1725
STR
77–149
DC_1725 DC_0914
QIW87629.1
1 419
Architecture
STR
STR 10-419
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage OLIVR4
[NCBI] 		2723772 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizogenic Agrobacterium biovar 1
[NCBI] 		1183400 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Agrobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW87629.1 [NCBI]
Genbank nucleotide accession
MT234341.1 [NCBI]
CDS location
range 52821 -> 54080
strand +
CDS
ATGATCACGACAATTTGCCCTTCCGTTCCTTGCCCGACGAATGAAGGAACGCCGTTGCCGCCCGCATCCGTGGTTGTCTGCGGCTGTGGTTCTGGCGGCGGTGGCGGTGAACAGGGACCGCGCGGTTACAGTGCGTATGAAGTCGCCGTAATGAACGGCTTTGTTGGCACGGAAGCCGAATGGCTTGCTTCTCTCGAAGGTCAGCCGGGACCGCAGGGCATTCAGGGTGATATAGGACCGCAAGGCCCTGCCGGTGCCGATGGTGCTGACGGTCCTGCCGGTGCTGACGGGGATAGCGCCTATCAGGTCGCCGTCGATAACGGTTTTGTCGGCACCGAAGCCGAATGGCTGGCGTCGCTTGTCGGCCCTGAAGGTCCGCAGGGTATTCAGGGTATTCAAGGGCCTGCGGGTGCCGATGGTCCACAAGGGCCTGAAGGCCCGCAAGGTATTCAGGGTGTTGCCGGTCCCGAAGGTCCGCAGGGTGAACAAGGCCCTGTCGGTGCTACGGGTCCGCAGGGTGGCGGTCTGGTTCCTGACGAGTATGGTGATCTGACTGATGCGAAGGTAACCGAAATCGAAACCGCCGATGTCGATTGGGTTTTTCTCGTCAACCCTGACGGCGATCTTCGTTCGAATCAGACTATTCCGGCAGGTATTTCAGGTGATATGGAACGTCACTTGATCATGTATCATGCCGATACTGATACATGGTCCGATTACGGTCAGTTTACCGGTGTCGAAGGCCCTCAGGGACCGCAAGGTATCCAAGGCCCTGCCGGTGCCGCTGGTCCGCAAGGTGAAGATGGTCCGCAAGGCCCGCAGGGTGTTCAAGGCCCTGCGGGTGCCGATGGTCCGCAGGGTGAACAGGGTCCGCAGGGTATTCAGGGTATTCAAGGTGAACAGGGTCCGCAAGGCCCTGCCGGTGTCGTACCATTGACGGAAATCGTCACTGTGCCCGATGCTCTCTATTCGTTCCTGTTGACGGGGGCTGAAAAATACCATCGGTTCACCAATGCTGCCGCGAAAACCGTCATAGTTCCGACAAACGCAACCGTTGCATTCCCGTTTGCAGCGGGTGGGACAACCACAATCGCGTTTATCAATGCGGGCGATGGTCTGTTGACGATTTCCCCGGCTGCGGGCGTGACGATAAACAAGCGCGCCGATCAAACGCTCACTCTGACAAAGTTCGCTACCGCTGTGTTGACGAAAGTTGGCGCGGATGAATGGGACTTGTCCGGTGATATGGAGCCGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d27e5819a6768b6e5997d2d9e93c9e4bed9e9ddd82cd4c284860aaa0f437c113
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7425
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50