Protein

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Genbank accession
YP_009883458.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNNYYIDPSFAGASDGTINAPFKSFSAMLAAGITHPCTIGLKRGTVLVENVLAGSALKNTTNQYSYITDYGDKKLPKPVWINSTVWGSQESGYTYTGQHLTSRNTRNLIISNINFSMRSYDIYKPITGALPIETIWLRLEILNDSTEPTIDANVWVQDCKFSAAVIEGTARRRNYEAVVHIIVTSNGAYRADKFGVKGCNFVGVSRAITCTGNHSYAADTTDNSQGTLYSRGVQVENCSFVRNGRGAVLFQGVESALSAETPDVLQSYMANCNYSRYRWDSMNDNDTAQSADAAFWTWRCNRILIERIYGGGSYSLNLDCELLDFDYMTWDSVARHCVSFHNSAILLSMGASSLTSQGAARAPYNSGLYTVDQYFYVRRNGQGNNVIKECVSYNDGVDLGNAAFTPYAGFIKTGGGAGTYNLTVQNCLCIDTVSRFSKPLITTLPLMSTPGLEKVKLINNVFIFPYLAKASLLPTISASQEVAGTRIESNRFYCVPLDLTSINENLSQGSNVINATFGYPNSLVNIPRQVPPSLEESLGLLKTLGLMS
Physico‐chemical
properties
protein length:548 AA
molecular weight: 60041,94500 Da
isoelectric point:6,60335
aromaticity:0,10401
hydropathy:-0,13321

Domains

Domains [InterPro]
DC_1961
STR
1–545
DC_1961
IPR011050
STR
3–465
IPR011050
YP_009883458.1
1 548
Architecture
STR
STR 1-545 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009883458.1
1 548
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,5686
Central domain 50 537 489 0,9782
C-terminal 538 548 10 0,5352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-537
C-terminal
538-548

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Magnus
[NCBI] 		2589660 Uroviricota > Caudoviricetes > Pantevenvirales > Taipeivirus > Taipeivirus magnus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009883458.1 [NCBI]
Genbank nucleotide accession
NC_049462 [NCBI]
CDS location
range 33609 -> 35255
strand +
CDS
ATGAACAATTATTACATAGATCCGTCCTTTGCAGGGGCATCTGATGGAACCATAAACGCCCCTTTCAAATCTTTTAGTGCAATGTTGGCTGCAGGGATAACCCATCCCTGCACTATTGGCCTGAAAAGAGGGACGGTTCTCGTTGAGAACGTTTTGGCTGGTTCCGCATTAAAGAATACAACAAACCAATATTCATACATAACGGATTATGGTGACAAGAAATTACCCAAACCGGTTTGGATAAACTCAACTGTGTGGGGATCACAAGAATCAGGATACACGTATACTGGACAACATTTGACTTCAAGAAATACCAGAAATTTAATAATTTCGAATATCAATTTTTCTATGAGGTCATATGATATTTATAAACCTATCACGGGCGCTTTGCCTATAGAAACTATTTGGTTGCGGTTAGAAATTCTTAATGACAGCACAGAGCCTACAATTGACGCGAATGTATGGGTGCAGGATTGTAAATTCTCTGCGGCTGTTATTGAAGGAACTGCCCGTAGGCGTAACTATGAAGCGGTCGTTCACATTATAGTGACTTCCAATGGTGCTTATCGGGCTGATAAATTTGGCGTAAAAGGTTGTAATTTCGTTGGAGTAAGCAGGGCGATTACGTGTACAGGAAATCATTCTTATGCCGCTGATACAACTGACAACAGTCAAGGAACTTTGTATTCCAGAGGCGTGCAGGTAGAAAATTGTTCTTTCGTCAGGAATGGGCGTGGTGCTGTTTTATTCCAAGGCGTGGAAAGTGCATTGAGCGCCGAGACACCAGATGTTTTACAATCCTATATGGCCAATTGCAATTATAGTCGGTATCGTTGGGATTCTATGAATGACAACGATACTGCCCAATCTGCTGATGCTGCTTTCTGGACTTGGCGTTGCAATCGTATATTGATTGAAAGAATATATGGTGGGGGAAGTTATTCTTTAAATCTTGACTGTGAATTATTAGATTTCGATTATATGACATGGGATTCAGTAGCCCGTCATTGTGTATCTTTTCATAATTCTGCTATATTGTTGTCGATGGGGGCTAGTAGTTTGACTTCCCAAGGAGCAGCTCGCGCTCCATACAACTCTGGATTATATACTGTAGACCAGTATTTTTATGTTCGGAGAAATGGTCAAGGGAATAATGTTATCAAAGAGTGTGTGTCTTACAATGACGGTGTAGATTTAGGAAATGCTGCATTTACCCCTTACGCTGGGTTTATCAAAACTGGTGGCGGGGCTGGTACATATAACTTGACAGTACAAAATTGCTTGTGTATAGACACTGTGTCAAGATTTTCTAAGCCATTGATCACAACTTTACCTTTGATGTCCACCCCAGGACTTGAAAAAGTGAAATTAATCAATAATGTGTTCATTTTCCCGTATCTGGCTAAAGCATCGTTGTTGCCAACAATATCAGCGAGTCAAGAAGTTGCCGGGACAAGGATAGAGTCTAATAGATTTTATTGTGTTCCTTTGGATCTTACTTCTATAAATGAAAATTTATCCCAAGGTTCCAATGTCATTAACGCGACATTTGGATATCCTAACAGCTTAGTAAATATTCCTAGACAAGTTCCGCCGAGTTTAGAAGAATCTCTTGGATTACTCAAAACTCTTGGCTTAATGTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
436c15e65f45cbcee6e76ba046ca366e2bf3dc6b91548d213db84cbeb81c9ca3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Klebsiella pneumoniae Myophage Magnus Acevedo Ugarriza,L.E., Michalik,J., Newkirk,H., Liu,M., Gill,J.J. and Ramsey,J. 2019-09-26 — GenBank