Protein

View in Explore
Genbank accession
QHR74143.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATVTVIPSDITNLKNEVSTLKQDVAGKASTTDVDNKLKLYLKQTDLSSELGSGRYSGSFYPLTGNDAFYLFNLNTTAQSANLWLDPNAGVSQVLRSTSSSRYKRSVESVIDEYADLMLEMRPVWYRSTCESDRKDWGWYGLIAEEVGEIAPEYVHWRPLQEGEDPAIASSNGMVAEGVMYDRLTVPLIHHVKKLKAENDEMRKEIDELKAVVAALVNKPTTLD
Physico‐chemical
properties
protein length:224 AA
molecular weight: 25028,89100 Da
isoelectric point:4,94098
aromaticity:0,08036
hydropathy:-0,39196

Domains

Domains [InterPro]
DC_0536
STR
3–224
DC_0536
IPR030392
CHP
99–206
IPR030392
Coil
Unmapped
192–219
Coil
QHR74143.1
1 224
Architecture
STR
STR 3-224
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage tinuso
[NCBI] 		2696448 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR74143.1 [NCBI]
Genbank nucleotide accession
MN850634.1 [NCBI]
CDS location
range 38641 -> 39315
strand -
CDS
ATGGCTACAGTCACTGTTATACCTAGTGATATAACGAATCTGAAAAATGAAGTTTCAACACTAAAACAGGATGTTGCAGGAAAAGCATCAACTACTGATGTTGACAATAAGTTGAAGCTGTATCTAAAACAAACTGATCTATCATCCGAGTTGGGTAGCGGAAGGTATAGTGGGAGTTTTTACCCACTAACTGGTAACGATGCATTTTATTTATTTAATCTTAACACAACCGCTCAATCAGCAAACTTATGGCTTGATCCAAATGCTGGAGTTTCGCAAGTTTTACGCTCCACTTCCTCTTCTCGTTATAAGCGCAGCGTAGAATCGGTTATTGATGAATATGCGGATCTGATGCTTGAAATGCGTCCTGTTTGGTATCGGTCAACTTGTGAAAGCGACCGTAAAGATTGGGGATGGTACGGGCTAATCGCGGAAGAGGTTGGAGAAATTGCGCCGGAGTACGTTCACTGGCGACCGCTGCAAGAAGGAGAAGATCCTGCCATTGCTTCAAGTAATGGCATGGTGGCGGAAGGCGTTATGTATGACCGCCTCACTGTTCCACTGATTCACCACGTTAAGAAACTGAAAGCGGAAAACGATGAGATGAGAAAAGAAATTGACGAGCTAAAAGCGGTTGTAGCGGCACTGGTAAACAAACCAACCACGTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
377b31f8b1ea8a2c7001ac1c7614938a27766a180f553f944925771839e5eb32
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank