Protein

View in Explore
Genbank accession
AUR82127.1 [GenBank]
Protein name
FCCH domain ubiquitin-activating enzyme E1
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPKITQRSFTSGEIAPALQSRADLTKYATSLHLCENFLVRAQGGVYSRPGFRFVGELDNSARVGRLIPFSFNTEQTYMLVFEHLKVRVIKDGGFVLDGGGPAIFELATPYTEAQLPRLGFTQNADVMTIVHPDHDPRNLNRMADDNWSLTTIDYAPTVDSPTFSSGSVDKAITGISQSNPAVVTAVAHGFVTGNLISINGVAGMTQVNGRSFIITALTNDTFELNGEDSTGHDPYTSGGTASRQNGATTIGEGFGDYDKTYTYVVTAVDAEGSESLASAEVSITTGSLATTAGVRLTWDSVPEATYYRVYKDPSVGTGIYGWIGDSNNNSFDDYNVAPITSDAPPSDRRPFDGEGNKPSAVTYYQQRQVFANTYNEPQATFTTQTNNFDSLRVSNPARDDDAVTWTIAARQVNEIRHLLPLDTLLILTSGAEWKTTEGDTGVLTPSTIGVRIQSYNGCSIIPPVVINSTALYLQEKGTRLRDLGYEFSSDKYTGNDLSLMSEHLFEGHTIVSMAYADEPYSIVWCVRDDGVLLGLTYQREHQVWGWHKHTTQGEFEYVATVTEGSRDAVYAIVKRTVNGSVVRYVERLEPRESINAEDCFYLDSGLTYDGDPATVISGLDHLNGETVSILTDGYTVPDQVVEDGKVTLVRAASKVHVGLSYLPAIETLDIDTPSPSQTLKAQSVSVSKVTIEVDGSRGGWVGPRQDNGDLAPMSEIKPRFDSDNYDPIALKTYKSEVFIQPQWGKGGGVRIEQRAPLPMSILSIIPQIDIGGN
Physico‐chemical
properties
protein length:773 AA
molecular weight: 84192,48390 Da
isoelectric point:4,74022
aromaticity:0,08926
hydropathy:-0,28991

Domains

Domains [InterPro]
DC_0058
STR
1–768
DC_0058
IPR042302
STR
168–243
IPR042302
IPR032418
RBD
179–242
IPR032418
AUR82127.1
1 773
Architecture
STR
STR 1-768 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82127.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9936
Central domain 157 358 203 0,1535
C-terminal 359 773 414 0,0778
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-358
C-terminal
359-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.021.B._10N.222.51.F9
[NCBI] 		1881416 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82127.1 [NCBI]
Genbank nucleotide accession
MG592404 [NCBI]
CDS location
range 9437 -> 11758
strand +
CDS
ATGCCGAAAATCACACAGCGTAGCTTTACATCAGGTGAAATTGCGCCAGCATTACAATCTCGTGCTGACCTCACCAAGTACGCTACCAGTTTACATCTTTGTGAGAACTTCCTGGTGCGTGCACAGGGTGGTGTTTACTCACGTCCTGGGTTCAGGTTCGTCGGTGAGCTTGATAATTCTGCTCGTGTGGGTCGCCTTATCCCCTTCAGCTTCAACACTGAACAGACTTACATGCTCGTGTTTGAGCACTTGAAAGTCCGTGTGATTAAAGACGGTGGGTTCGTGCTTGACGGTGGTGGACCTGCAATCTTTGAACTTGCTACACCTTACACTGAAGCACAGTTACCACGTTTAGGGTTCACACAGAACGCTGACGTGATGACAATCGTTCACCCTGACCATGACCCTCGTAACCTAAACCGTATGGCTGATGATAATTGGTCATTGACGACAATTGATTATGCACCGACTGTTGACAGCCCAACGTTCAGCAGTGGGTCAGTGGATAAAGCAATCACAGGTATTTCTCAATCGAACCCTGCTGTGGTAACTGCTGTGGCTCACGGGTTCGTCACTGGTAACCTGATCAGCATCAACGGTGTAGCAGGTATGACGCAAGTGAATGGTCGCTCGTTCATCATCACAGCGTTAACCAACGACACATTTGAGCTTAACGGTGAAGACTCCACAGGTCACGACCCGTACACGTCAGGTGGTACAGCTAGTCGCCAGAACGGTGCAACAACCATCGGTGAAGGTTTCGGTGACTATGACAAGACATATACATACGTTGTGACTGCTGTTGATGCTGAAGGTTCTGAATCGCTGGCATCTGCTGAAGTGAGTATCACAACAGGTTCACTGGCAACTACAGCAGGTGTACGTTTAACCTGGGACAGTGTACCTGAAGCAACTTATTACCGTGTTTACAAAGACCCTTCAGTGGGTACAGGTATCTATGGTTGGATCGGTGACTCGAACAACAATTCATTTGACGACTACAATGTTGCACCTATCACCAGTGATGCACCACCGTCTGATCGCAGACCGTTCGATGGTGAAGGTAACAAACCATCTGCTGTGACCTATTACCAGCAACGTCAGGTCTTTGCTAACACCTACAATGAACCACAGGCGACGTTTACCACACAGACAAATAACTTCGATTCACTGCGAGTGTCTAACCCTGCTCGTGATGATGATGCGGTGACATGGACCATTGCTGCACGACAGGTCAATGAAATACGTCACTTGCTACCGCTTGATACACTGTTGATCCTGACATCAGGTGCTGAGTGGAAGACTACTGAAGGTGACACTGGGGTATTAACACCGTCAACGATTGGTGTACGCATCCAGTCATACAACGGCTGTTCAATCATTCCACCGGTTGTGATCAACAGTACAGCGTTATACCTGCAAGAGAAAGGTACACGACTCCGTGACCTGGGTTATGAGTTCAGCAGTGACAAGTATACCGGTAACGATTTATCACTGATGTCAGAACACCTGTTTGAAGGTCACACGATTGTATCAATGGCGTATGCAGATGAACCATACAGCATTGTGTGGTGTGTCCGTGATGACGGTGTACTGTTGGGTTTAACTTATCAGCGTGAACATCAGGTGTGGGGTTGGCACAAGCACACGACACAGGGTGAATTTGAATACGTCGCAACAGTCACTGAGGGAAGTCGTGACGCTGTGTATGCTATCGTGAAGCGCACAGTCAATGGTTCAGTAGTTCGATATGTTGAGCGACTTGAACCACGTGAGTCAATCAATGCTGAAGACTGTTTCTATCTCGATTCTGGTCTGACGTATGACGGTGACCCTGCAACCGTGATCAGTGGTCTTGACCATTTGAACGGTGAGACTGTGAGCATCTTGACTGACGGTTACACTGTACCTGACCAGGTTGTTGAAGATGGTAAGGTCACACTTGTACGAGCTGCTTCAAAGGTTCATGTGGGTCTGAGCTACTTACCTGCAATTGAAACATTGGACATTGATACACCGTCACCAAGTCAGACATTGAAAGCACAATCAGTCTCGGTGTCGAAGGTCACCATTGAGGTTGATGGTTCTCGTGGTGGTTGGGTAGGTCCACGTCAGGACAATGGTGACCTTGCACCGATGAGTGAGATCAAGCCACGTTTCGACAGTGATAACTATGACCCTATTGCATTGAAGACATACAAATCTGAAGTGTTCATTCAACCGCAATGGGGTAAAGGTGGTGGTGTCCGTATTGAACAGCGTGCACCGTTACCAATGTCTATACTTTCAATAATTCCACAAATCGATATAGGCGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4b6c08693dcbf019fafe03ef73697ed8a898208dee4925b7443f08010d074d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9171
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank