Protein

View in Explore
UniProt accession
M4QDT1 [UniProt]
Protein name
Putative DNA polymerase I
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAYTEIAMAVGNSPEILARXVKVMMSSGFQPYGDVQMLSGTLFGMKMAKGTTNNVEDFMVTSDTTIQGLVNRVNRYLAQGWKRFGNAHFEDGAYISALAKGDFASDEXGGSGEAGPQGPVGPQGPAGPAGEAGPQGPQGPTGATGPAGAAGAKGDTGPAGPAGPQGPQGETGEAGPQGPMGPTGATGPAGPKGDKGDAGPVGPAGLTFRGVYDAATAYVKDDVVTFNNSSWFATTAVTGENPDVSDSWELLAAQGAPGPQGATGPAGPTGPAGPAGIQGPQGERGLQGEQGPTGPQGLQGAAGAVGPQGPAGPQGEPGIQGPVGPQGPIGPKGDKGDPGISRTFMKVKXSPDVGTNHMLRLPAPLNNLSVGIRLDSTVLFSIRAWIDEGSTARNIRGNIEGFNNTDNYFNTTVRTAISSSSVTGTALVTGIGEFQRIRPYVFSFYETTTGTAWRVTINLFTVGYVVSDNQDLCIEVVRLDA
Physico‐chemical
properties
protein length:481 AA
molecular weight: 48258,92040 Da
isoelectric point:4,75642
aromaticity:0,06695
hydropathy:-0,31862

Domains

Domains [InterPro]
DC_1122
ATT
3–106
DC_1122 IPR050149 DC_1535
DC_0876
STR
149–288
DC_0876
IPR008160
STR
151–205
IPR008160 IPR036573 IPR008160
IPR003610
CBM
209–251
IPR003610 DC_2298
G3DSA:2.10.10.20
ATT
211–250
G3DSA:2.10.10.20
M4QDT1
1 481
Architecture
ATT
STR
ATT
STR
RBD
ATT 3-106 | STR 149-210 | ATT 211-250 | STR 251-356 | RBD 357-481
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiKP26
[NCBI] 		2886927 Uroviricota > Caudoviricetes > Drexlerviridae > Rogunavirus > Rogunavirus KP26
Host Salmonella enterica subsp. enterica serovar Oranienburg
[NCBI] 		28147 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030246 carbohydrate binding Molecular Function IEA:InterPro (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Molecular Function IEA:InterPro (UniProt)
GO:0005975 carbohydrate metabolic process Biological Process IEA:InterPro (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
c4f6af1426ec1684746289045a9862b4677bd2479d9fb65d46702a150caf0a08
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50