Protein

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Genbank accession
WNV56446.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGRITGSWERPIQGVSQQADKDRIDGQCTKQENLTPSPLYGLMKRVGTRHVKKILETSDPDSLWYQYDRGGSERYLILVEPNEYPRVFDLEGNEKVVNVNSGSDDYLKVSNPKKSLRMKTIADYTFIANTNVVTETLPDKTPTNPSMAIVYCQYATYGRDYQIIIDGNKVASLTTPDGAVASHIEKVRTNYITEQLSNQINGKEKTTETVSVKRRTVTGGSGTTQEYYVTVSSSVSVVVSLYNKSTGSNTTAISVSGSDIILSSGNNQGNTIEVVYEAVGAPDSQYTSEVHGNTLFIERIDGTSFSISTVDSANGDDLIAIQDKVRQLSNLPPYAPEDYIVKVQNNEGFEANSYWLKAVPNDDTDQSGSSVRWVESTAQDTLYKFNLDTMPHQLVSLADGTFELSYGEWEERKVGDDTTNPFPSFVGGTIQSIGTFQNRMLFTSGESAIFGKTNEFFNFFRETTQEESSDDPIDVFADADQVNNLLHHAILEGDIVFFAENGQFLIDGSKPITKDSLVFRQVTSYPMNTDAQPAVTGESIMFSFIAGKYAGLREMFTDSLTDTKRARPITEHVAEYIEGVPIDLIASPNINLLLVRTDINNHTIYAYNWLWSGEQRVQAAFHKWIFDGDVMFAKFVSDKVYFVIDRGNGVYLEQMPISNDADDDGLTFPVSLDQRAVVNANWTGTRWEWDNPYEVEDTDMLEFVRGTGCWDSDKGTTVIFETDGNTYWSYDDLADVTSGVTSCNLTAGTKYTSRFVPTQPSIKDQSGRVMGLDRFTLGKVTLNYESIGNITVYVYDLYSKSRQWKYEYNGRRLGSWNNRVGFSPLAEGQFSFPVRLQAQQAQFEIVTDDYRPFILRDMEWEGMFKQRGRRI
Physico‐chemical
properties
protein length:871 AA
molecular weight: 97825,36740 Da
isoelectric point:4,70436
aromaticity:0,11022
hydropathy:-0,45855

Domains

Domains [InterPro]
DC_1891
ATT
1–279
DC_1891
IPR058003
TTP
226–871
IPR058003
WNV56446.1
1 871
Architecture
ATT
TTP
ATT 1-279 | TTP 280-871
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV56446.1
1 871
Domain Start End Length (AA) Confidence
N-terminal 1 673 673 0,8376
Central domain 674 860 188 0,3034
C-terminal 861 871 10 0,7321
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-673
Central
674-860
C-terminal
861-871

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValA_R15Z
[NCBI] 		3044218 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV56446.1 [NCBI]
Genbank nucleotide accession
OQ745668 [NCBI]
CDS location
range 13512 -> 16127
strand -
CDS
ATGGGAAGAATAACAGGAAGCTGGGAAAGACCTATACAGGGTGTCAGCCAGCAAGCTGATAAAGACAGAATAGACGGTCAATGCACTAAGCAGGAAAACCTTACACCATCTCCATTGTACGGTCTAATGAAGAGAGTAGGTACTAGGCACGTTAAGAAGATACTAGAAACTTCTGACCCTGACTCTCTTTGGTATCAGTATGACAGAGGGGGTTCAGAGCGTTATCTTATTCTAGTAGAGCCTAATGAATATCCTCGTGTATTTGATTTAGAAGGTAATGAGAAAGTTGTCAATGTTAATAGTGGCTCTGATGATTACTTAAAGGTATCTAATCCTAAGAAATCTCTAAGGATGAAGACAATAGCTGACTATACATTCATTGCCAATACTAATGTGGTTACAGAGACTTTGCCTGATAAGACCCCTACTAACCCTTCTATGGCGATAGTGTATTGTCAGTATGCAACCTATGGTAGAGATTACCAGATAATCATAGACGGTAACAAAGTAGCCAGCCTTACAACACCTGATGGTGCAGTAGCAAGCCATATTGAGAAAGTACGTACTAACTATATAACAGAGCAACTAAGTAACCAAATTAATGGCAAAGAGAAGACTACAGAAACTGTTAGTGTTAAGAGACGGACAGTGACTGGCGGGAGCGGTACTACACAAGAGTACTACGTTACGGTATCAAGTAGTGTAAGTGTTGTTGTTAGCTTGTACAACAAATCAACAGGCTCTAATACAACTGCAATAAGCGTAAGTGGTTCAGATATCATACTATCCTCAGGCAATAACCAAGGCAATACAATAGAAGTTGTATACGAGGCAGTAGGTGCGCCTGACAGTCAGTACACATCTGAAGTACATGGTAATACATTGTTTATAGAGCGTATAGATGGAACATCTTTCTCTATATCTACTGTAGATAGTGCGAACGGTGATGACCTTATTGCTATACAGGACAAGGTTAGGCAGCTATCTAATTTGCCACCCTATGCACCAGAGGACTACATAGTTAAGGTACAGAACAATGAAGGATTTGAGGCAAACTCCTATTGGCTGAAGGCAGTACCTAACGACGACACAGACCAATCAGGTTCTTCCGTAAGGTGGGTGGAGTCAACTGCTCAGGATACTCTATATAAGTTCAACCTTGATACAATGCCGCATCAACTCGTAAGCCTAGCTGATGGTACTTTCGAGCTGAGTTACGGTGAGTGGGAAGAGCGCAAGGTAGGGGACGACACAACGAACCCCTTCCCTTCTTTTGTAGGTGGCACGATTCAGAGTATAGGAACCTTCCAGAACCGTATGCTATTCACATCAGGTGAGTCAGCTATCTTTGGAAAGACGAATGAGTTCTTTAACTTCTTCAGAGAAACTACTCAGGAGGAGTCATCTGATGACCCTATAGATGTTTTCGCAGATGCAGACCAAGTTAACAATCTCCTGCACCACGCTATACTCGAAGGTGATATTGTGTTCTTTGCGGAGAACGGTCAATTCCTTATTGATGGCTCAAAGCCTATAACAAAAGATAGCCTAGTGTTTAGACAGGTTACTTCCTACCCGATGAACACAGATGCACAGCCAGCCGTTACAGGTGAGTCTATCATGTTCTCGTTTATAGCAGGTAAGTATGCAGGTCTTAGGGAGATGTTCACTGACTCTCTTACTGACACAAAGAGGGCAAGACCTATTACGGAACATGTGGCAGAATACATAGAAGGTGTACCTATCGACTTAATCGCCAGTCCTAATATCAACCTTCTACTAGTTCGAACAGATATAAATAACCACACCATCTACGCTTACAACTGGCTATGGTCTGGTGAGCAGAGGGTACAGGCTGCATTCCACAAGTGGATATTTGACGGTGATGTTATGTTCGCCAAGTTCGTAAGTGACAAAGTTTACTTTGTAATAGATAGAGGTAACGGAGTTTACTTAGAGCAAATGCCTATAAGTAATGACGCAGACGACGATGGACTTACGTTCCCTGTTAGCTTAGACCAACGCGCAGTGGTTAACGCGAACTGGACTGGTACTCGTTGGGAGTGGGATAACCCATATGAAGTCGAAGACACAGACATGCTAGAGTTTGTAAGAGGTACTGGCTGTTGGGATTCTGACAAAGGTACTACAGTGATATTCGAGACTGATGGTAATACTTACTGGTCTTATGATGACCTAGCTGATGTAACTAGTGGAGTGACATCCTGTAATCTCACAGCAGGTACTAAGTACACTTCTAGATTTGTCCCTACGCAACCTAGCATTAAAGACCAATCAGGTCGTGTTATGGGGTTGGACAGGTTCACACTAGGCAAAGTTACACTCAACTACGAAAGCATAGGTAACATAACTGTGTACGTTTATGATTTGTACTCAAAGAGCCGTCAATGGAAATATGAATACAACGGAAGGCGACTTGGTAGCTGGAATAATAGGGTAGGATTCTCTCCATTGGCTGAAGGTCAGTTCAGCTTCCCTGTTAGGCTGCAAGCTCAGCAGGCACAGTTCGAAATTGTTACAGATGATTATAGACCTTTCATACTTCGTGATATGGAGTGGGAAGGGATGTTCAAACAAAGAGGCAGACGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9b6ffb0313671a30f9ef13dde3ad6a4178efaf59e127be644146de8e12bd266
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3092
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50