Protein

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Genbank accession
WHS68277.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MPLMRLRNVGKTGVTTDIPSYDLKPSDWSWANNVRFQADRVQKVGGSKAALTRLMPQEHPLGVVQWPLTESLLYGTWKPGTSKGSLWVARGNSHENISKRASVGSTPFEYECSPEYSWDYTTLSNTVIFNTRLSDPQGIKNGQAYFSDLPGWGKPTSSTTANWKANRIRAFKNYLLCMGMWENGVEFPQRVRWSDVAMVGSLPSNWYENDQTKDGGFNDLTDSLSHIIDGRPLRDSFVVYTNRDTFIMDYVGGTMVFNFRKIFSDSGMLAPNCCVEFEGQHFVISEDDIFVHNGSTRRSVATGRVKDYLMAQIASNNHEATRVYAYPARKEIWITYVSDGNTPSNADDKVWSCDKAAIWSWQYDTWSFTDLPNIYDIGIGLSPETDSRFWYDSEFVPTPEDPTQYGDYPWEDPKIPEDIWKNKVQGFTRHVMFGASSDMCFYNLDNGYYWEKYDAVSKTISKVPVVCELERSALDFDEQEPDISYHKWWRAVYPQMGGTGTVRFYVGGSNSPNGEPVWDSWQDFDIELDSKVDCFSNYRYPAIKLLDSTEGEWSMVGYDVEYFKEGNR
Physico‐chemical
properties
protein length:568 AA
molecular weight: 65036,55710 Da
isoelectric point:4,89886
aromaticity:0,14261
hydropathy:-0,58063

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WHS68277.1
1 568
Domain Start End Length (AA) Confidence
N-terminal 1 371 371 0,4868
Central domain 372 557 187 0,2818
C-terminal 558 568 10 0,9960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-371
Central
372-557
C-terminal
558-568

Taxonomy

  Name Taxonomy ID Lineage
Phage Lundtoftevirus Lu221
[NCBI] 		3430536 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WHS68277.1 [NCBI]
Genbank nucleotide accession
OQ829281 [NCBI]
CDS location
range 22390 -> 24096
strand +
CDS
ATGCCTCTAATGAGATTACGAAATGTAGGGAAGACTGGTGTAACAACCGATATCCCTTCATATGATTTAAAACCCTCGGATTGGTCTTGGGCTAACAACGTTCGATTCCAAGCAGATAGGGTTCAGAAAGTGGGTGGCTCTAAGGCCGCCCTAACTCGTCTTATGCCACAAGAACATCCACTTGGTGTCGTACAGTGGCCTCTTACTGAATCACTGTTATATGGTACTTGGAAGCCTGGGACATCTAAGGGTAGTTTATGGGTGGCTCGTGGTAACTCACATGAGAATATTTCAAAAAGAGCCTCCGTAGGTAGTACACCTTTTGAATATGAGTGTTCTCCAGAGTATTCATGGGACTATACAACACTCTCTAACACAGTTATTTTTAATACTCGTCTTTCAGACCCACAAGGTATTAAGAATGGTCAAGCTTACTTCTCAGACCTTCCGGGTTGGGGTAAGCCCACATCATCTACTACTGCAAACTGGAAAGCTAACCGAATTCGTGCATTTAAGAACTACTTGCTGTGCATGGGTATGTGGGAGAATGGTGTAGAATTTCCTCAGCGTGTACGATGGTCTGATGTTGCAATGGTCGGTTCACTTCCTTCTAATTGGTATGAAAATGACCAGACTAAAGATGGTGGATTTAACGACCTGACAGACTCATTATCACACATCATTGATGGTCGTCCTTTGCGTGACTCCTTTGTTGTTTATACAAACCGAGACACATTCATCATGGACTACGTTGGTGGTACAATGGTGTTCAACTTCCGTAAAATCTTCTCAGATTCAGGGATGCTTGCACCAAACTGTTGTGTTGAGTTTGAAGGTCAGCACTTTGTTATTTCAGAGGATGACATTTTCGTTCACAACGGTTCCACTCGTAGGTCTGTTGCTACAGGTCGTGTGAAAGATTACCTCATGGCTCAGATTGCCTCTAACAACCACGAAGCTACTCGTGTATATGCATATCCTGCTCGTAAAGAGATTTGGATTACATATGTTAGTGACGGTAACACTCCATCTAACGCTGACGATAAGGTTTGGTCTTGTGATAAGGCTGCAATCTGGTCTTGGCAGTATGATACTTGGTCTTTTACAGACTTACCTAATATCTATGATATTGGTATCGGATTATCACCTGAGACTGACTCTCGTTTCTGGTATGATAGTGAGTTCGTACCAACACCTGAAGACCCGACACAATATGGTGACTATCCGTGGGAAGATCCTAAGATTCCTGAAGATATTTGGAAGAACAAGGTTCAGGGGTTCACAAGACATGTAATGTTCGGTGCCTCATCTGATATGTGCTTCTACAACCTTGATAATGGTTACTATTGGGAGAAGTATGATGCGGTGTCTAAGACTATTTCCAAAGTTCCAGTTGTTTGTGAATTAGAGCGTTCTGCACTGGATTTCGATGAACAAGAACCTGATATCTCTTACCATAAATGGTGGAGGGCAGTTTACCCACAGATGGGTGGTACTGGTACAGTTCGATTCTATGTTGGTGGCTCTAACTCCCCTAACGGTGAACCTGTTTGGGATTCTTGGCAGGACTTTGATATCGAACTTGATTCTAAAGTTGACTGCTTCTCAAACTACAGATACCCAGCAATTAAACTGCTTGATTCTACGGAAGGTGAGTGGTCAATGGTTGGATATGATGTTGAATACTTCAAAGAAGGGAATAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
721fa05e1c524cb9b77b3723df4da26d14d8a4f681fa3d31dd2a3ee6137f4737
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8534
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of Novel Plasmid-specific Phages Infecting Bacteria Carrying Diverse Conjugative Plasmids Parra,B., Cockx,B., Lutz,V.T., Bronsted,L., Smets,B.F. and Dechesne,A. 2024-01-11 — GenBank