Protein

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Genbank accession
UAW59277.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIKVGGVEVVDNNRQLKNIGSVDSGSVNVLNSALNTDPTRGTLTKTFSNGETASITLNQNVSTAPVVSVIKEVSQTGITSKGAWDVNSTASNYDLHNTAYNTTLTPSSTTTTGSFSTLSNVSGTFLSVSSVFGNPRGIRLSSDGTKVYVINEHRSTGQDTIRQWNLSTAFDLSTATHYGDFAETQSEQYARGFDFNGNGTKLFIVGYSQNTVHEYSLSTAYDVTTATATSNTFSVSSITTPSYLTFGDSGSKMYVTSGGNGNIYQYTLSTAYDITTVTNTQVISNPNANYGAVRGIQFADNGSTYYSLVQDTNWKIYENTLSTAYDINSTVTQTGVVDISGQVQNPFGLHVDGRHFYTYDIQSGNQYAYYYTLAQNTVNNLALGTGSFASTDVGKRIKGNGGSVVLTSTSGSYSTTGGSEFTDFTTIASGSWTMHGLQSAGDDDGLTLAGVVSTSTISLLDIFNDNSCQYLLELDNDLLDTGGNYNASGSNSFNTGSKYGTHAFYTGSANTFTSQINQPENSGWMMSFWFRRDGVSGLTSNNRMVDFKENTTSQGTTISFENDNQFHFILRANQHGNGSRSFGGSSLCDDSWHHIVVGSGNGSTVLAYLDGVAITSDSGKNRSDSHEGTGILWGTGYGGNCTNSYYDQIRYFNRALTASEVLALYDEGGGTGYIPTSQYHVGVTNVGGQIDTTTWQDINSMTADQNLNAGEAYYAVSTDDRTTWSVAKGSDGVRPIVRDNAGTWQYNSQESSSTVGWDVANGTYDNKNRFLDGSINGFEISNDGTKIYYVKNNLQTYQRTLTTAYDVSTAGAESTVTTSTQDGDPRDVTLSADGTKMYLLGDTNNSIFQYTLSTAWDITTATYASKSFNMTSQDTSPFSLEFKYDGTRMWVLGNNTKYIYQFDLSTAWDVSTASYNNVRFLTTSSGLVSAPKGIVVKSDGSELYMVDSDYDRVYVYDFGTNFDLSTLSYSNTAFDHTSETTNPRDIAFSNDGQKMYVIDFSNYVYQYSTDTTIITYSTGTTWTDATTNDEFYALQQALGATSVNRMDKTQLDAVADGSHFTLGDTLDLMIALKQDTSSGNPPNSDGVSINYDAEALNQGAVLGTDYDFDFPASNRVRITSNAAQNLKIRVV
Physico‐chemical
properties
protein length:1132 AA
molecular weight: 122482,07000 Da
isoelectric point:4,49303
aromaticity:0,11219
hydropathy:-0,42164

Domains

Domains [InterPro]
IPR015943
STR
85–415
IPR015943 G3DSA:2.60.120.200 SSF63829 DC_1851
SSF101908
STR
123–322
SSF101908 PF13385 IPR015943
IPR013320
STR
518–671
IPR013320 IPR051200
UAW59277.1
1 1132
Architecture
STR
STR
STR
RBD
STR 85-415 | STR 462-672 | STR 721-1055 | RBD 1056-1132
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAW59277.1
1 1132
Domain Start End Length (AA) Confidence
N-terminal 1 413 413 0,0544
Central domain 414 612 200 0,4592
C-terminal 613 1132 519 0,4863
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-413
Central
414-612
C-terminal
613-1132

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-738
[NCBI] 		2873409 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59277.1 [NCBI]
Genbank nucleotide accession
MZ892992 [NCBI]
CDS location
range 27299 -> 30697
strand -
CDS
ATGGCGATAAAAGTTGGCGGCGTAGAAGTTGTAGATAACAACAGGCAGCTTAAAAATATTGGTAGTGTAGATAGCGGTTCAGTTAACGTCCTAAACTCTGCACTAAACACCGATCCTACACGGGGTACTTTAACGAAGACTTTTTCTAATGGTGAAACAGCAAGCATCACGCTTAACCAAAACGTGTCTACTGCACCTGTCGTGTCTGTTATTAAAGAAGTATCACAGACAGGTATTACCTCTAAGGGTGCATGGGATGTAAATTCTACAGCGTCCAACTATGATCTGCATAACACTGCGTATAATACTACACTGACCCCGTCATCTACGACAACCACAGGTTCTTTTAGCACATTAAGTAATGTTTCTGGTACTTTTCTAAGTGTCAGTAGCGTATTTGGTAACCCACGGGGAATACGTCTTAGCTCTGACGGTACTAAAGTCTATGTGATTAATGAGCATAGAAGTACAGGACAAGACACTATACGTCAGTGGAATTTAAGTACAGCCTTTGATTTAAGTACTGCTACGCATTATGGGGACTTTGCAGAAACCCAAAGTGAACAGTATGCAAGGGGTTTTGACTTTAACGGTAATGGTACAAAGCTGTTTATTGTTGGCTACTCTCAAAACACAGTCCATGAATATTCTTTAAGTACTGCTTATGATGTAACAACGGCTACAGCAACCTCTAACACCTTTTCAGTAAGCAGTATCACCACACCTTCGTACTTAACCTTTGGAGACAGTGGTTCTAAAATGTATGTGACTTCAGGGGGTAACGGTAATATATACCAATACACTTTAAGCACTGCCTACGACATAACAACAGTTACAAATACTCAAGTTATATCCAACCCTAATGCTAACTATGGTGCAGTCAGAGGTATACAATTTGCCGACAATGGTTCGACTTATTATTCTCTAGTACAAGATACTAATTGGAAGATATATGAAAACACACTTAGCACGGCTTATGACATAAACTCTACGGTGACTCAAACTGGTGTTGTAGATATTAGTGGTCAAGTTCAAAACCCCTTTGGGTTACACGTAGATGGTCGGCATTTTTATACCTATGATATTCAGTCAGGTAATCAATATGCTTACTACTACACGTTAGCACAAAATACTGTTAACAATTTAGCACTTGGAACAGGCTCCTTTGCATCTACAGACGTAGGTAAACGTATTAAAGGTAATGGCGGCAGTGTAGTCCTTACAAGTACTTCAGGTTCGTATAGCACTACAGGAGGGTCAGAGTTTACAGACTTCACCACTATTGCTTCAGGCTCTTGGACTATGCATGGGTTGCAATCTGCAGGTGATGATGATGGGCTTACTCTGGCAGGTGTTGTGTCTACTTCTACCATCAGCCTTCTTGATATTTTTAACGATAATAGCTGCCAGTACTTACTAGAATTAGATAATGACCTTTTAGATACTGGCGGTAATTATAACGCTTCTGGTTCTAACTCTTTTAACACAGGATCAAAGTACGGTACTCACGCATTCTATACAGGTTCTGCTAACACTTTTACTAGCCAAATAAATCAGCCTGAAAATAGCGGTTGGATGATGTCCTTTTGGTTTAGACGGGATGGCGTAAGTGGCCTTACGAGTAACAACCGTATGGTAGATTTCAAAGAGAACACAACCTCTCAAGGTACAACTATTTCTTTTGAAAATGACAACCAGTTCCACTTTATCCTTCGAGCAAACCAACATGGGAACGGCTCACGATCTTTTGGGGGTTCCTCACTTTGCGATGATTCTTGGCATCACATTGTGGTAGGTTCAGGTAACGGGTCCACTGTTCTTGCATATCTTGATGGTGTTGCCATTACCTCTGATAGTGGAAAAAATAGAAGTGATAGCCACGAAGGTACAGGTATACTTTGGGGTACTGGATATGGTGGCAACTGCACAAACTCCTACTATGACCAAATTCGTTATTTTAACAGAGCGCTTACTGCCTCTGAAGTCTTAGCGTTATATGACGAAGGTGGTGGCACAGGCTATATTCCTACGTCCCAATATCATGTTGGTGTAACAAACGTAGGTGGGCAAATAGATACCACTACTTGGCAAGACATTAACAGCATGACTGCCGATCAAAACCTAAATGCAGGTGAAGCATACTATGCAGTCTCTACAGATGATCGCACTACATGGTCAGTCGCAAAGGGCAGCGATGGTGTTCGTCCTATTGTGAGAGATAATGCGGGTACTTGGCAGTATAATAGTCAAGAAAGTTCTAGCACTGTTGGTTGGGACGTTGCGAATGGTACTTACGACAATAAGAACAGATTTCTTGATGGTAGTATAAATGGTTTTGAGATTAGTAATGATGGAACAAAGATATACTACGTCAAAAACAACCTTCAGACTTACCAGAGAACATTAACTACAGCTTATGATGTGTCTACTGCGGGTGCAGAATCTACGGTAACTACAAGTACCCAAGACGGTGATCCAAGGGATGTTACTCTTTCCGCAGACGGTACAAAGATGTATCTGCTTGGAGATACAAATAACTCTATATTCCAATACACTCTAAGCACCGCTTGGGATATTACTACAGCAACCTATGCAAGCAAGTCGTTTAATATGACTTCCCAAGACACTTCTCCTTTTAGTCTTGAGTTCAAATACGATGGTACTCGTATGTGGGTATTAGGTAATAACACGAAATATATTTACCAGTTTGATCTCTCAACTGCATGGGATGTTTCAACAGCATCTTACAATAATGTTAGATTCTTAACGACTTCATCGGGTCTTGTGTCTGCTCCTAAAGGTATTGTTGTTAAGTCTGACGGTTCTGAATTGTACATGGTTGATAGTGATTATGACAGAGTTTATGTTTATGATTTTGGCACAAACTTTGATCTGTCTACCCTTTCATATAGCAATACTGCTTTTGATCACACGTCAGAAACCACTAACCCAAGGGATATAGCTTTCAGCAATGATGGACAGAAAATGTATGTTATAGACTTCAGTAACTATGTCTATCAATACAGTACTGACACTACTATAATTACTTACAGCACAGGAACCACATGGACTGATGCCACAACTAACGACGAGTTCTACGCACTGCAGCAAGCACTAGGTGCTACCTCTGTGAACCGCATGGACAAGACGCAGCTAGACGCAGTAGCAGACGGTTCTCACTTCACACTAGGCGATACGTTAGACCTGATGATTGCACTAAAGCAAGACACCAGTTCAGGTAACCCACCTAATTCAGATGGTGTGTCTATTAACTACGATGCAGAGGCACTTAACCAAGGTGCGGTGCTAGGGACTGACTATGACTTTGATTTCCCTGCAAGTAATCGGGTTCGTATTACCTCTAATGCAGCACAAAACTTAAAGATTAGGGTGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52293750e6eae729a95059d1175b207f827e2cfc459f0f679c8ed83bba4c8574
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2979
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank