Protein

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Genbank accession
AFC61949.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEYLGVVQLGSLYLDSSPIPLPTRPWVSNSYPGSLSDKGNGNTYESSSFSKYSLGNTDASDTHKLKWIKIKDGNKYIYICDRVILNGVSWDELNALGYVTGTDISIDGQLYKCRTLTGGRNIRPGSGSYGGGYPTDNEWDRIICNEANIEGLPKPQPYDLIQIDDTYKSFEGEHNQLWHWWGNNSWCQEIFEGNSTYRVYRGYNSARIFDYHTSGIRFNHTGWRPVLEQEIPIDPPGKPIPVFPASEDETKPTPTDTHITVQTKYNGNPEDMAEMLVSVYDLTDDKQGYYSNWVSNTTGVLTIQETLNIAHRYRIMVRHKNIIGAMSDTLEIYVVVGYYGKYKLSESVTAGQFKPVSVYGQTQNLVMKTQTFPETEGSKVRLVPEVMNKITVASVSGNYLVFADSTKTPTIGDKLTKDNQIYNITNIAGTPKYTLYDNNVLTASTVNYFLGNAEGNSVIKYKDNIFFLVADIKNSKVQLIRTDLYGENYTIVFNQNSLLVQDLGITQLDNFCYIYMLEKSTSQMKYRRVNLDTLSVDPEQSGYDFGETWLSVSAVAIKATQRIALAIKRKNSDGTCDICFRTFPLDNLSSIGTLNVFNKTEENLLSYPVIVNIENKTNYSSEQAVFQYVCVENGHLYLNSYRWSGVVAPDQEITLATIPYTDLKLSVTMSQINGDWYRMVKVVGHNADTNQYAIFFRVFDKSLHELAISTLYFPEKITGAKTIASTKGDIRVVYSMESKIANRKTTLEHLDTWNDEITIKDNETLKQGQIFDLVDYGATYYGKYPAILMIRSPLGNPLYEYMTFLVEYTLEDVVANQITLDKPVTSDMGEVIKYYDYDIEVQAGEDKAVVKPNLVTDEYYEYDAQFNSKKSERDITIRGRNTKLTTLYYYNY
Physico‐chemical
properties
protein length:892 AA
molecular weight: 101341,68480 Da
isoelectric point:5,17629
aromaticity:0,11883
hydropathy:-0,41110

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFC61949.1
1 892
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6999
Central domain 11 209 200 0,1324
C-terminal 210 892 682 0,0887
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-892

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phi8074-B1
[NCBI] 		1147137 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium sporogenes
[NCBI] 		1509 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC61949.1 [NCBI]
Genbank nucleotide accession
JQ246028 [NCBI]
CDS location
range 12457 -> 15135
strand +
CDS
ATGGAGTATTTAGGCGTAGTGCAATTAGGAAGTCTATACCTAGATTCAAGTCCAATACCACTTCCAACTAGACCATGGGTATCTAATAGTTATCCCGGGTCTTTAAGTGATAAAGGTAATGGCAATACGTACGAATCTTCATCATTTTCAAAATACAGTCTTGGCAATACAGATGCTAGTGACACACATAAGTTAAAGTGGATAAAGATAAAAGATGGAAATAAGTATATTTATATTTGCGATAGAGTAATCCTCAATGGTGTAAGCTGGGACGAACTGAATGCTCTAGGCTATGTTACAGGTACTGACATTAGTATCGACGGTCAATTATATAAATGTAGAACATTAACTGGAGGTAGAAATATTAGACCAGGTAGTGGAAGTTACGGTGGAGGATATCCAACGGACAACGAATGGGATAGAATCATATGTAATGAAGCTAATATAGAAGGACTACCGAAACCTCAACCTTACGATTTAATTCAAATAGATGACACATATAAATCCTTTGAGGGAGAGCATAACCAACTATGGCATTGGTGGGGAAATAACTCATGGTGTCAAGAAATATTTGAGGGAAATTCTACTTATCGTGTTTATCGTGGATATAATTCTGCACGCATTTTTGATTATCATACTAGTGGAATTAGATTCAATCATACCGGTTGGAGACCAGTACTAGAACAAGAAATACCAATAGACCCACCCGGCAAACCAATACCAGTGTTCCCGGCATCAGAGGATGAGACAAAGCCAACACCAACAGATACACATATTACAGTTCAGACTAAATACAACGGTAATCCAGAAGATATGGCAGAAATGTTAGTATCTGTCTACGACTTAACAGACGATAAGCAAGGATATTATTCTAACTGGGTCTCTAATACGACCGGGGTATTAACAATACAAGAAACCTTAAACATAGCACATAGATATCGAATTATGGTAAGGCACAAAAATATAATTGGAGCTATGTCAGATACTTTAGAGATATATGTGGTAGTTGGGTACTACGGAAAATATAAACTATCAGAATCAGTAACAGCAGGACAATTTAAACCTGTATCAGTATATGGACAAACACAAAACTTAGTAATGAAAACACAGACATTCCCAGAAACAGAAGGTTCAAAAGTAAGACTAGTACCAGAAGTAATGAATAAAATAACAGTAGCAAGTGTTAGTGGTAATTATTTAGTATTTGCAGACTCAACAAAAACTCCAACAATCGGGGATAAACTAACAAAGGATAATCAAATATATAACATAACAAATATAGCAGGAACACCAAAGTATACCTTATATGATAATAATGTTCTTACAGCTAGCACGGTCAACTACTTCTTAGGAAATGCTGAAGGCAATAGTGTTATCAAATACAAAGACAATATATTCTTCTTAGTAGCTGATATAAAAAATTCTAAAGTTCAACTTATAAGAACGGACTTATATGGTGAAAATTACACCATAGTATTTAATCAAAACTCACTTTTAGTACAAGATTTAGGAATAACTCAGCTAGATAACTTCTGTTATATTTACATGTTAGAGAAATCCACAAGCCAAATGAAATATAGGCGTGTTAATTTAGATACTTTAAGTGTAGACCCAGAACAGTCCGGATATGATTTTGGGGAAACATGGTTATCTGTATCAGCAGTAGCTATAAAAGCAACTCAACGAATAGCTTTAGCCATAAAAAGAAAAAATTCCGATGGAACTTGTGATATTTGTTTCAGAACCTTTCCTTTGGATAATCTAAGTAGTATAGGAACATTAAATGTATTTAACAAAACCGAAGAAAACCTATTAAGCTACCCAGTAATTGTGAACATAGAGAATAAAACTAACTATTCATCAGAGCAAGCGGTGTTTCAATATGTGTGTGTTGAAAATGGTCATTTGTATTTAAATAGTTACAGGTGGTCTGGCGTTGTTGCTCCTGACCAAGAAATAACTTTAGCTACAATACCTTACACTGATTTAAAGTTGTCCGTAACAATGTCGCAAATAAATGGAGATTGGTATCGAATGGTTAAAGTAGTAGGGCACAATGCGGATACTAACCAGTATGCAATCTTTTTTAGGGTGTTTGATAAGAGTCTCCACGAACTAGCTATAAGTACATTATATTTTCCAGAAAAGATAACAGGAGCTAAGACGATAGCATCTACTAAAGGAGACATACGAGTTGTATATAGCATGGAATCAAAAATAGCCAATAGAAAAACCACTTTAGAGCATTTAGATACATGGAACGATGAAATAACCATCAAAGATAATGAAACACTTAAACAAGGTCAAATATTCGATTTAGTGGATTATGGAGCGACTTATTACGGTAAGTATCCGGCAATCTTAATGATAAGGTCTCCGCTAGGAAACCCTCTGTATGAATATATGACATTCTTAGTTGAGTATACTTTAGAGGATGTAGTAGCAAACCAAATCACATTAGATAAACCAGTAACATCAGATATGGGGGAAGTAATAAAATACTACGACTACGATATAGAAGTACAAGCAGGAGAGGACAAAGCAGTAGTAAAACCAAACCTTGTTACAGACGAATATTACGAATATGATGCACAATTTAATAGTAAGAAATCCGAAAGAGATATAACCATTCGGGGGAGAAACACAAAACTTACAACTTTATACTATTACAACTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1ce12e9fe3d6c132c9d0a1d8ff6ce753650f00511b3fe0f4889d4f656046fa56
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6466
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic Sequence of Bacteriophage ATCC 8074-B1 and Activity of Its Endolysin and Engineered Variants against Clostridium sporogenes Mayer,M.J., Gasson,M.J. and Narbad,A. 2012 22427494 GenBank