Protein

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Genbank accession
YP_010672687.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWAQPVGPGPAAPAPLFIDSGSTFPQIKNTISGSFNFNGGGRSFPISGWDGSGQIVIVPTGSLCWQWEVPPNLVPDVYCVNNIYVENTTSFRVNLNQNPGSNPLFDCGFNVYQIWPRADRNYGITFSNTADYFSISDAGVVGQCVWAWQGTINNALQIPDIGGFYMPNAVVFANWSDGGLGLSYTSGDRVIRVYQNRPYINGNTNEGGSVFARVAVFCNGAGVPEHNGGLNIYSPGTAQCVFSTNRTPFTIDNFIGSGGGNTGMAYPMIPLSSGIGAIKGQGSGWRYQQMRSHTMSGSSVGTGYGRYLFQWDQNYDLGSDTVVNLSIPVINAAKVFAGL
Physico‐chemical
properties
protein length:343 AA
molecular weight: 36727,55800 Da
isoelectric point:5,26832
aromaticity:0,13120
hydropathy:-0,08513

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434
IPR045604
STR
36–315
IPR045604
YP_010672687.1
1 343
Architecture
ATT
STR
ATT 1-40 | STR 41-315 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010672687.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0097
Central domain 11 209 200 0,0184
C-terminal 210 343 133 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EP335
[NCBI] 		2070199 Uroviricota > Caudoviricetes > Mktvariviridae > Nieuwekanaalvirus > Nieuwekanaalvirus EP335
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010672687.1 [NCBI]
Genbank nucleotide accession
NC_070979 [NCBI]
CDS location
range 20741 -> 21772
strand +
CDS
ATGGCATATGGAATTTGGGCACAACCTGTAGGGCCGGGGCCAGCTGCCCCTGCTCCTCTCTTTATAGATAGCGGGAGTACTTTCCCTCAGATAAAGAATACCATAAGTGGTAGTTTCAACTTTAACGGCGGTGGGAGATCTTTCCCTATTAGTGGGTGGGATGGTTCAGGTCAGATTGTTATTGTCCCAACAGGATCTCTTTGTTGGCAATGGGAAGTCCCACCTAACCTAGTACCAGATGTTTATTGTGTAAACAATATCTACGTAGAGAACACCACATCATTTCGTGTCAACCTTAACCAGAACCCCGGAAGCAACCCTCTTTTCGATTGTGGTTTTAACGTTTACCAAATCTGGCCCAGAGCTGATAGGAACTACGGTATAACCTTTTCTAACACAGCGGATTACTTCTCTATCTCTGATGCTGGAGTTGTTGGTCAGTGTGTTTGGGCTTGGCAAGGAACAATAAACAATGCTTTACAAATTCCAGATATCGGTGGATTCTACATGCCTAACGCTGTGGTTTTTGCTAACTGGTCTGATGGTGGTTTAGGTCTATCTTACACTTCTGGTGACAGGGTTATACGTGTTTATCAAAACCGTCCATATATTAATGGAAACACTAACGAAGGTGGTTCTGTCTTTGCTAGGGTTGCTGTGTTTTGTAATGGTGCTGGAGTTCCTGAGCACAATGGTGGTTTGAATATTTACTCACCGGGAACTGCACAGTGTGTATTCTCGACAAATAGGACACCTTTTACCATCGACAATTTTATAGGCTCTGGTGGGGGTAACACTGGAATGGCTTACCCTATGATACCTCTTTCCTCTGGTATTGGGGCTATAAAGGGTCAAGGAAGTGGTTGGAGATATCAGCAGATGAGATCTCATACAATGTCCGGTTCTAGTGTAGGAACGGGTTATGGGAGATATCTTTTCCAGTGGGATCAGAATTATGATTTAGGGTCTGATACTGTGGTCAATTTATCTATACCTGTAATTAATGCAGCTAAAGTTTTTGCTGGTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3479e355b51a9e158faee4624e18f62931f0573e15ff6ceca0ff86202da093a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6866
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50