Protein

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Genbank accession
AIM41094.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFIKTLGDNGALGQAPYIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPNGSDYIKTANPRNDLRMVTVADYTFIVNRNVAVQKNEKSVNLPNYNPKQDGLINVRGGQYGRELIVHINGKDVAKYKIPDGSQPEHVNNTDAQWLAEELAKQMRTNLSGWAVNVGQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQAFSKLPPNAPNGYMVKVVGDASRSADQYYVRYDAERKVWVETLGWNTENQVLWETMPHALVRASDGNFDFKWLEWSPKSCGDIDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASVANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASDTLTSKSVKLNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFVYKFLYLNEELRQQSWSHWDFGANVQVLACQSISSDMYVILRNEFNTFLTKTSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHLPTIYGANFGRGKITILEPDGKITVFEQPTAGWKSDPWLRFDGNLEGRMVYIGFNIDFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYENSGAFDIYIENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 89339,97220 Da
isoelectric point:6,07804
aromaticity:0,12091
hydropathy:-0,40290

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
AIM41094.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIM41094.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9936
Central domain 140 348 210 0,2410
C-terminal 349 794 445 0,2202
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CICC 80001
[NCBI] 		1527506 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM41094.1 [NCBI]
Genbank nucleotide accession
KM242061 [NCBI]
CDS location
range 28457 -> 30841
strand +
CDS
ATGGCGCTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCAATGGTTTTCATTAAGACGCTTGGAGACAATGGTGCGTTGGGCCAAGCTCCGTACATCCACCTGATTAACCGTGATGAGAACGAACAGTATTATGCGGTGTTCACTGGTACAGGAATCCGTGTGTTCGACCTCGCTGGTAACGAGAAGCAAGTTAGGTATCCTAACGGTTCCGACTACATCAAGACCGCTAATCCGCGTAACGACCTGCGAATGGTTACTGTAGCAGACTACACGTTCATCGTTAATCGCAACGTTGCTGTACAGAAGAACGAAAAGTCTGTCAACTTACCGAATTACAACCCTAAGCAGGATGGATTGATTAACGTTCGTGGTGGTCAGTATGGTAGGGAACTAATTGTGCACATTAACGGTAAAGACGTTGCGAAGTATAAAATCCCAGATGGTAGCCAACCTGAACACGTAAACAATACGGATGCCCAATGGTTAGCCGAAGAGTTAGCCAAGCAGATGCGCACTAACTTGTCTGGTTGGGCTGTAAATGTTGGGCAAGGGTTCATACACGTTACCGCACCTAGCGGTCAACAGATTGACTCCTTCACGACTAAAGACGGATACGCAGACCAGTTGATTAACCCTGTGACCCACTACGCTCAGGCGTTCTCGAAGTTACCACCTAATGCTCCTAACGGCTACATGGTGAAAGTCGTAGGGGACGCCTCTAGGTCTGCCGACCAGTATTATGTTCGGTATGACGCTGAGCGGAAAGTTTGGGTTGAGACTTTGGGTTGGAACACTGAGAACCAAGTCCTATGGGAAACGATGCCACATGCCCTTGTGCGAGCCTCTGACGGTAATTTCGACTTCAAGTGGCTTGAGTGGTCTCCTAAGTCTTGTGGTGACATTGACACCAACCCTTGGCCTTCTTTTGTTGGTTCAAGTATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTTAGTGGTGAGAACATCATATTGAGTCGTACAGCCAAATACTTCAACTTCTACCCTGCGTCCGTTGCGAACCTTAGCGATGACGACCCTATAGACGTAGCTGTGAGTACCAACAGAATAGCAATCCTTAAGTACGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACAGCTTCTGATACTCTCACGTCGAAGTCGGTTAAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTATGGGATTGGGCGCAATGTCTACTTTGCTAGTCCGAGGTCCAGCTACACGTCCATCCACAGGTACTACGCTGTGCAGGACGTAAGTTCCGTTAAGAACGCGGAGGACATCACAGCACACGTTCCTAACTACATCCCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACGGAAAACTTCTGTTCGGTGCTATCTCATGGGGACCCTAGTAAAATCTTCGTGTACAAATTCCTGTACCTGAACGAAGAGTTAAGACAACAGTCATGGTCTCACTGGGACTTTGGGGCAAACGTACAGGTTCTAGCTTGTCAGAGCATCAGCTCAGATATGTACGTTATCCTTCGTAATGAGTTCAATACGTTCCTAACTAAAACCTCTTTCACTAAGAACGCCATTGACTTACAAGGCGAACCTTACCGTGCCTTTATGGACATGAAGATTCGCTATACGATTCCTAGTGGAACATACAACGATGACACCTTCACTACCTCGATTCACCTACCAACAATCTACGGTGCAAACTTCGGGAGGGGTAAAATCACTATACTGGAGCCTGATGGTAAGATAACTGTATTTGAGCAACCTACGGCTGGGTGGAAAAGCGACCCTTGGTTGAGATTCGACGGTAACTTGGAGGGTCGAATGGTATACATTGGGTTCAACATCGACTTCGTATATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCCACGGAAGACATTGGTCGCTTGCAGTTACGCCGAGCGTGGGTGAACTATGAGAACTCTGGGGCGTTCGACATTTATATTGAGAACCAATCGTCCAACTGGAAGTACACAATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACAGTGTCCATCTTGTCTGATGAGACTACCCCGCTGAACATCATTGGATGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57764ff85ac9b343ea0709ab5e2bfafd80dca3cb6e2eb1324c2b7771d52ee0e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8885
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, Genome Sequence, and Analysis of Escherichia Phage CICC 80001, a Bacteriophage Infecting an Efficient L-Aspartic Acid Producing Escherichia coli Xu,Y., Ma,Y., Yao,S., Jiang,Z., Pei,J. and Cheng,C. 2016 26501200 GenBank