Protein

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Genbank accession
YAO57224.1 [GenBank]
Protein name
distal tail protein Dit
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MSVTYDGKNLTELFNEGQGRAVPVDVTKNVASNFNNNYQDQGHRRYGQQFLYNTLSVKQIQVSFTLVGNYDYFNSVAETLGGYLNVDKPKPLIFGDEPNKVWEAIPSGQASLAVDKNTSPITATVTVTFDVPKSYSENKAEALVSSDGETKFGSIKKVSTGHYKATLKNFGTAETYPDIKLKFNSDNGWVGIVKSATESYEVGNPKEWDNQTVKKSEVLFDYASSNGEHRIPNGLSQGLKNIGISNDNINDTKPNGTLYIDNAWGRPHIALQSGQIASVTFDIPRDSNGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLGCEYNFLAGDGKGGFRIVDRKNFLGTHIEQHNPFNEHRGWSDIMRFDDVVQYYWWGSYPRYSIPEIKGKKSDKIHVIFGKVGNAPLVTHMYLDDFIYRKDNVYKEEDIPNRFHMGSILEVDMSKGKTLIDNLPASNELTYLSEPFSIGIGETEIDIYTSSWIAKDPTIEISWKERFV
Physico‐chemical
properties
protein length:516 AA
molecular weight: 58221,31060 Da
isoelectric point:5,68409
aromaticity:0,12791
hydropathy:-0,52054

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–136
G3DSA:2.40.30.200
DC_0420
STR
1–516
DC_0420
IPR006520
Unmapped
4–134
IPR006520
IPR008841
STR
34–130
IPR008841
YAO57224.1
1 516
Architecture
ATT
STR
ATT 1-136 | STR 137-516
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAO57224.1
1 516
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,9372
Central domain 216 425 211 0,2273
C-terminal 426 516 90 0,4718
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-425
C-terminal
426-516

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage XL-DM4
[NCBI] 		3464491 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO57224.1 [NCBI]
Genbank nucleotide accession
PX283045 [NCBI]
CDS location
range 14396 -> 15946
strand +
CDS
ATGTCAGTAACTTATGACGGCAAGAACTTAACCGAATTATTCAATGAAGGTCAAGGACGTGCCGTTCCAGTGGATGTCACCAAAAACGTGGCATCAAATTTCAACAACAACTATCAAGACCAAGGGCACAGGCGTTATGGTCAGCAATTCCTATATAACACCTTATCAGTTAAACAGATTCAAGTATCGTTTACTCTAGTTGGTAACTACGATTACTTTAATAGCGTAGCTGAAACGCTTGGTGGCTATCTGAATGTAGATAAACCGAAACCATTGATTTTCGGAGATGAACCTAATAAGGTTTGGGAAGCTATCCCGTCTGGTCAAGCATCGTTAGCAGTTGATAAGAACACCTCACCGATTACCGCAACAGTAACGGTTACATTTGATGTTCCCAAAAGTTACAGCGAAAACAAAGCCGAAGCCTTGGTAAGTAGCGATGGCGAAACCAAGTTCGGCAGTATTAAAAAGGTATCGACTGGGCATTACAAGGCAACTTTAAAGAACTTTGGTACGGCTGAAACATACCCAGATATTAAGTTAAAATTTAATTCAGATAATGGCTGGGTTGGGATTGTGAAATCTGCTACTGAAAGCTACGAGGTTGGTAATCCTAAAGAATGGGATAACCAAACGGTTAAAAAGTCAGAGGTACTGTTTGATTACGCTTCATCAAACGGAGAGCACAGAATCCCTAACGGTTTATCTCAAGGATTGAAAAACATTGGCATCTCAAATGATAATATCAACGACACCAAGCCAAACGGAACTCTTTATATCGATAATGCTTGGGGTCGTCCTCACATTGCATTACAGAGTGGTCAGATAGCATCAGTTACATTTGACATCCCAAGAGACTCTAATGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGACAAATTTTTTGGCTCGGCTCTGCAAACCAAATGGGATACTTAAAAATCTGTGTAACAGATGCAAGCGGCACTTTCTTGTATGGTGTTGAAACTTTTAAACGTTACAATGGTTTAGGCTGTGAATATAATTTTCTAGCTGGTGACGGCAAGGGAGGTTTCCGTATTGTCGACAGGAAGAATTTTTTAGGAACGCACATCGAGCAGCACAACCCATTTAATGAACATAGGGGATGGTCAGATATTATGCGGTTTGATGATGTCGTTCAGTACTACTGGTGGGGTTCATACCCAAGATATTCTATCCCTGAAATAAAGGGTAAAAAATCAGACAAAATCCATGTCATTTTTGGTAAGGTCGGCAACGCACCACTTGTTACACACATGTATTTAGATGATTTCATTTATCGAAAAGACAACGTTTATAAAGAAGAAGATATTCCTAATCGTTTTCACATGGGTTCTATCTTAGAGGTGGACATGTCTAAAGGTAAAACCCTTATCGATAACTTGCCAGCATCTAATGAGTTAACATATTTGTCTGAACCATTCAGCATTGGTATTGGTGAAACTGAAATTGACATTTACACGTCAAGCTGGATAGCCAAAGACCCAACAATTGAAATTTCATGGAAGGAGCGCTTTGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ffabfaf030f2ac5ea17bb41d7951088ea715eb1b2b1240b7d411443f44c87e1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9079
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Temporal dynamics of the S. thermophilus phage population in a yogurt production facility Pujato,S.A., Marangon,A.M., Rousseau,G., Tremblay,D., Moineau,S., Quiberoni,A. and Guglielmotti,D.M. 2025 — GenBank