Protein

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Genbank accession
YP_010669979.1 [GenBank]
Protein name
putative endosialidase
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MASEIRVNQIQNRSGLSTVTFSDTGVVISGITTISDLRTSGTTVVAAGTTSAPSISPTGDSNTGIFFPAADTVAIAEGGVEVLRVDSSSNVGINSTSPARKLDVVDSGASGSVIRSRVTTNNGGYLAYEALNSSGTSVFSVTHNGRINLSENIVFASGQGLDFSATANSSGTMTSELLSDYEEGTWTPTFTNGGTGAYSNRTGKYTKIGNTVVAHGYLQFSSVGTASGTVQISGFPFPCNNYGSSSTIHGNSWSVARSNLNGLISPSVSYMDCYYNTGGTVASIQHSDIGVGNFLFTIVYQTSS
Physico‐chemical
properties
protein length:304 AA
molecular weight: 31321,85810 Da
isoelectric point:5,08473
aromaticity:0,08224
hydropathy:-0,04211

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010669979.1
1 304
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9346
Central domain 12 210 200 0,0776
C-terminal 211 304 93 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-304

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SRM01
[NCBI] 		2781608 Uroviricota > Caudoviricetes > Pantevenvirales > Serangoonvirus > Serangoonvirus essarone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669979.1 [NCBI]
Genbank nucleotide accession
NC_070963 [NCBI]
CDS location
range 3071 -> 3985
strand +
CDS
ATGGCGTCAGAGATTCGTGTAAATCAGATACAAAACCGAAGTGGATTAAGCACCGTAACCTTCAGCGATACTGGTGTGGTTATTTCTGGTATTACAACGATTTCTGACTTAAGAACCAGTGGAACCACAGTAGTCGCAGCAGGAACTACCAGTGCTCCATCCATAAGTCCAACAGGCGACTCTAACACTGGTATTTTCTTCCCTGCTGCTGATACTGTAGCAATCGCAGAAGGTGGTGTTGAGGTTTTAAGAGTTGATAGTTCTAGTAACGTTGGTATAAACAGCACTTCACCAGCAAGAAAACTTGACGTTGTAGATAGTGGTGCTAGTGGTTCTGTTATAAGGTCTAGAGTCACTACAAATAATGGTGGATATCTAGCATATGAGGCACTAAACTCTTCTGGAACTTCTGTGTTTAGTGTGACACATAATGGAAGAATAAACCTTTCAGAAAATATTGTATTTGCTTCTGGACAGGGGTTAGACTTCTCTGCGACTGCTAACAGTTCAGGCACAATGACCAGTGAGTTGTTGAGTGATTATGAGGAAGGAACTTGGACACCTACTTTTACCAACGGTGGAACCGGTGCTTATTCAAATAGAACAGGTAAATATACTAAAATAGGAAACACAGTTGTTGCACATGGATATCTGCAATTTAGTTCAGTAGGAACTGCATCTGGAACTGTTCAAATTTCTGGTTTTCCATTTCCATGTAATAACTATGGATCTAGTTCTACAATTCATGGAAATTCTTGGAGTGTTGCTAGATCTAATTTAAATGGATTAATTTCACCATCAGTATCTTACATGGATTGTTATTATAATACTGGTGGTACTGTTGCATCTATACAGCATAGCGATATAGGTGTTGGAAATTTTCTATTTACGATTGTATATCAAACATCATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6a66b582c9f7f9e8a8a4dc4d854dce6c95c24bfdff78d762e50e53d448b102c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8287
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50