Protein

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Genbank accession
YP_010355982.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MAYTSKLKEWGAVAEERSEFPDGYRYTKENPPVTHYDNFLVHNLIEDVRHLVDLTNAIDPDNDGQVADAETIQGKSPSQLGGFKFIQSDNPDELTSGTTWFKDSNHLLFVADGEQYDIFPETGYDETSDFSGTEGFSLTHETPARTRLDAGSLKLINEQVVADFNSGISPDHGAWTWSDTSGISHESTNGRAEITSTGDATTPQLQRDVPVAQDIEFSFEVAEDTLNINDESIIRLDDENGNRELEIQFNDGAGNVSLSDGTELLPSWTAGQTYVFEVDPDFDAGTLDVVINGQTIIAGRPMDATAISNIWFGSKTMDSGSVRSVFVDDVHTGAREYGEVVVSCPEPDSRIEGWDLLRFDRTLAGESVVVDVEDETGTTLISDIDSNEDLSAAVDAATNPQIRVKFTREDTSNNPSFDSLYRRWVLRPGDNGVNIRAFGSDGADNVHEINFTAPVTKDEDGRVTVDLDPRYVNETGDSMSGDLDVNASVQVGDDLVLDDEDGEQFVVVGKDSDTLTIAEKGGSAFEQMDVNARQFTKQGHEVWHEGNRAYQVRKNNFISTKLSRR
Physico‐chemical
properties
protein length:565 AA
molecular weight: 62178,51880 Da
isoelectric point:4,20781
aromaticity:0,08142
hydropathy:-0,57027

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010355982.1
1 565
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9860
Central domain 135 361 228 0,0952
C-terminal 362 565 203 0,2897
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-361
C-terminal
362-565

Taxonomy

  Name Taxonomy ID Lineage
Phage Halorubrum virus Serpecor1
[NCBI] 		2721757 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Halorubrum coriense
[NCBI] 		64713 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010355982.1 [NCBI]
Genbank nucleotide accession
NC_062740 [NCBI]
CDS location
range 24976 -> 26673
strand +
CDS
ATGGCGTACACTTCTAAACTCAAGGAATGGGGAGCCGTCGCTGAGGAGCGGTCGGAGTTCCCCGATGGGTACAGGTACACGAAGGAAAACCCGCCCGTCACGCACTACGACAACTTCCTCGTTCACAATCTCATCGAGGACGTTCGACACCTCGTTGACCTTACGAACGCAATCGACCCGGACAATGATGGGCAGGTCGCTGACGCCGAGACGATTCAGGGGAAGTCCCCGTCTCAACTTGGTGGCTTCAAGTTCATTCAGTCGGATAACCCCGACGAGCTGACAAGCGGGACGACTTGGTTCAAGGACTCGAACCACCTCCTGTTCGTTGCTGACGGGGAGCAGTACGATATTTTCCCCGAGACGGGCTACGACGAGACGAGCGACTTCAGCGGCACGGAAGGCTTCTCGCTGACGCACGAAACTCCGGCAAGGACTCGCCTCGATGCGGGGAGTCTCAAACTCATCAACGAGCAGGTCGTCGCTGACTTCAACTCCGGTATCTCTCCCGACCACGGTGCGTGGACGTGGAGCGACACCTCGGGTATCAGTCACGAATCGACGAACGGACGAGCCGAGATTACGTCAACCGGAGACGCAACCACGCCTCAGCTTCAGCGGGACGTTCCCGTGGCTCAGGACATTGAGTTCTCGTTCGAGGTGGCCGAGGACACGTTGAACATCAACGACGAGTCTATCATCCGGCTGGACGACGAGAACGGGAATCGTGAGCTGGAAATCCAGTTCAACGACGGTGCGGGGAACGTCTCTCTGAGCGACGGTACGGAACTTCTCCCGTCGTGGACTGCCGGACAGACCTACGTGTTCGAGGTTGACCCGGACTTCGACGCTGGAACCCTCGATGTGGTAATCAACGGTCAGACCATCATCGCGGGTCGCCCGATGGACGCTACCGCTATCTCGAACATCTGGTTCGGCTCGAAGACGATGGACTCCGGTTCTGTCCGTAGCGTGTTCGTGGACGATGTTCACACCGGAGCGCGGGAGTACGGCGAGGTCGTCGTGTCCTGCCCGGAACCGGATTCACGCATCGAGGGGTGGGACTTGCTCCGGTTCGACCGGACGCTGGCCGGAGAGAGCGTCGTTGTGGACGTGGAGGACGAGACGGGTACTACGCTCATCTCTGACATAGACTCGAACGAAGACCTCTCGGCGGCTGTTGACGCGGCGACGAACCCACAGATTCGCGTGAAGTTCACTCGGGAGGATACGTCGAACAACCCGTCGTTCGATTCGCTGTACCGGCGGTGGGTTCTCCGCCCCGGTGACAACGGCGTGAACATCCGAGCCTTCGGCTCTGACGGCGCGGATAACGTTCACGAAATCAACTTCACCGCGCCGGTCACGAAGGACGAGGATGGTCGCGTGACGGTTGACCTCGACCCGAGGTACGTCAACGAGACGGGCGACTCGATGAGTGGCGACCTCGATGTGAACGCGAGCGTCCAAGTTGGTGATGACCTCGTTCTGGACGATGAAGACGGAGAGCAGTTCGTAGTGGTCGGGAAGGATTCTGACACGCTCACGATTGCGGAAAAGGGCGGCTCTGCCTTCGAGCAGATGGATGTGAACGCTCGGCAGTTCACGAAGCAGGGACACGAAGTTTGGCACGAAGGGAATCGGGCCTATCAGGTTCGCAAAAACAACTTCATTAGCACGAAACTTTCGCGGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d05530fb4ebcf4fe9efe9e20b9455accbabdc81f0cae956bdd8fde11ea7cd53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50