Protein

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Genbank accession
YP_009791568.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MELLMIHNHLGIAGVFTISKGKSLDTLEVVADWQSNLITDGGMDALGDSGSGYPRSMYDLIAYLAVGSGSATPAFTDTALGAQVAQVGRTTSDNGGTTTAPYYAYSRCQYQFPAGTATGVLSELGAKAYNNNTGAYILSTRALIKDSAGNPTTITVLSDEILVVTYELRMYVDTTPVVTTETIKGVSTTVTCKPIAMGRSGGLNGQSAVVWSDYVWGCYYFTGGTGDGTGAITDQYPPGNNVSYSDLYIQRVEYIPGTYYRDCVCRMSINNVPGSPITAAMGLSSCVAFQVGFSPGITKTGSETSNLRMRVSWSRYTP
Physico‐chemical
properties
protein length:318 AA
molecular weight: 33720,48460 Da
isoelectric point:5,03022
aromaticity:0,09748
hydropathy:-0,03365

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009791568.1
1 318
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,5300
Central domain 51 249 200 0,0380
C-terminal 250 318 68 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-249
C-terminal
250-318

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage phi Xc10
[NCBI] 		2024237 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host Xanthomonas sp.
[NCBI] 		29446 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791568.1 [NCBI]
Genbank nucleotide accession
NC_047840.1 [NCBI]
CDS location
range 38566 -> 39522
strand +
CDS
ATGGAGCTTCTCATGATCCACAATCACCTCGGCATCGCCGGTGTGTTCACTATCAGCAAGGGTAAGTCCCTCGACACTCTGGAAGTTGTCGCCGACTGGCAGAGCAACCTTATCACCGACGGTGGCATGGACGCACTGGGTGACTCCGGCAGCGGGTATCCCCGCAGCATGTACGACCTCATTGCCTACTTGGCAGTGGGCAGCGGTAGCGCAACCCCTGCGTTCACCGACACTGCTCTCGGCGCGCAGGTTGCGCAGGTTGGCCGGACGACTTCGGACAACGGCGGCACCACCACGGCTCCGTACTACGCCTACTCCCGCTGCCAGTACCAGTTCCCGGCAGGAACCGCCACTGGTGTGCTGTCCGAGCTGGGTGCCAAAGCGTACAACAACAATACCGGCGCTTACATCCTGTCCACTCGCGCGCTTATCAAGGACTCCGCAGGTAACCCGACCACCATCACGGTGCTGTCGGATGAAATCCTCGTGGTCACCTACGAGCTGCGCATGTACGTGGACACCACGCCCGTTGTCACTACCGAGACGATCAAGGGCGTGAGCACCACCGTTACCTGCAAGCCCATCGCCATGGGCCGTAGCGGTGGCCTGAACGGCCAGTCGGCAGTTGTGTGGTCGGACTACGTGTGGGGCTGCTACTACTTCACCGGCGGCACGGGCGATGGAACTGGTGCTATCACTGACCAGTATCCTCCGGGTAACAACGTAAGCTACTCGGACTTGTATATTCAGCGGGTAGAGTACATTCCGGGTACCTACTACCGGGATTGCGTTTGCCGCATGTCGATCAACAACGTCCCCGGTAGCCCGATCACGGCTGCGATGGGCCTGTCCTCGTGCGTTGCTTTCCAAGTCGGCTTCAGTCCGGGCATCACCAAGACCGGATCGGAAACGTCCAACCTGCGGATGCGCGTTTCGTGGAGTCGCTACACGCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f64dc63e5c1af8fcb9b1a8802dac6c2c528aa6e0bef7b747df99cc7d4a79f9d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8096
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50