Protein

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Genbank accession
YP_004421504.1 [GenBank]
Protein name
unknown structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAAMILSSADILRVLGGSEIIRLSAKLKIVDAKPALSGAEGLFIYIGKFPELEEFEATWTIWIESDGSEPDDLVIAEIKKLLPRVEVRSGLMAEVTTTEFRTEGTQGPPEAPQIQKVEVDLTQYEERFQALVEDVQDRMLLVSSGRAGKDGQDGRDGADGRDGRDGRDLVATEANLEDLQNVEEGIFKKKGQVLTWDGSRWTNLFIPQVYSAGGDNGGIASGNDAVSATVQWRFHEEGIGAEPHSGDFHTDSLDGELVTKIHVSKETNRGNDISLLINDLLSQGYDRLYVAQSADLSQAHLYQITGYLPTAAGTELTVLHIQTAGTEPDYVPNANYEFYISKSSSGNGIPEAPVNGQTYVRQDSAWVPRTIIPEAPVDGQTYVRQDSTWVPKTIIPEAPVDGQAYVRQNSTWVPTTTVPVDISNNALGELSDVNVPTPDAGEALIFNGTEWAAGGDFSGGSF
Physico‐chemical
properties
protein length:462 AA
molecular weight: 50059,79550 Da
isoelectric point:4,39504
aromaticity:0,07576
hydropathy:-0,33723

Domains

Domains [InterPro]
DC_0730
STR
84–372
DC_0730 G3DSA:6.20.230.10 G3DSA:6.20.230.10
Coil
Unmapped
114–134
Coil G3DSA:1.20.5.320
YP_004421504.1
1 462
Architecture
STR
ATT
STR 84-371 | ATT 372-417 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS2
[NCBI] 		753084 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0204
[NCBI] 		232353 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421504.1 [NCBI]
Genbank nucleotide accession
NC_015463 [NCBI]
CDS location
range 36178 -> 37566
strand +
CDS
GTGGCCGCAATGATTCTTAGCTCTGCCGATATCCTGCGCGTTCTCGGCGGCAGCGAGATCATCCGCCTGTCAGCCAAACTCAAAATTGTTGATGCCAAGCCTGCGCTAAGTGGCGCGGAGGGGCTGTTCATATATATTGGCAAGTTTCCCGAGCTTGAAGAGTTTGAGGCGACCTGGACGATCTGGATTGAGAGCGATGGCAGTGAGCCAGACGACTTGGTGATTGCCGAGATCAAGAAGCTCCTGCCCAGGGTGGAGGTGCGCTCCGGCCTGATGGCAGAGGTGACCACAACCGAGTTTCGCACAGAGGGCACTCAGGGCCCGCCAGAGGCGCCTCAGATTCAAAAAGTAGAAGTAGACCTGACTCAGTACGAAGAGCGCTTCCAGGCCCTCGTAGAGGACGTACAGGATCGAATGCTGCTCGTTAGCAGCGGAAGGGCTGGGAAGGACGGTCAGGACGGTCGCGATGGTGCCGACGGGCGAGATGGTCGCGACGGACGCGATCTGGTAGCTACCGAAGCCAACCTAGAAGATCTGCAGAACGTAGAGGAGGGAATCTTCAAAAAAAAGGGCCAGGTGCTCACTTGGGACGGCTCCAGGTGGACCAACCTGTTCATCCCCCAGGTCTATTCCGCTGGCGGCGACAATGGCGGCATCGCGAGCGGAAACGATGCCGTTAGCGCAACGGTTCAGTGGAGGTTTCACGAAGAGGGTATCGGCGCCGAGCCGCACTCGGGTGACTTCCACACCGATTCTCTGGACGGTGAACTTGTAACAAAGATCCACGTCAGCAAGGAGACTAATAGGGGCAACGACATCAGCCTACTGATTAACGACCTGCTCAGCCAAGGCTACGACCGCCTGTATGTGGCGCAATCGGCCGATCTGTCGCAGGCGCACTTGTATCAGATCACCGGCTATCTGCCCACGGCCGCTGGTACGGAGCTGACCGTCCTGCACATCCAAACTGCTGGCACAGAGCCAGACTATGTGCCGAACGCGAACTACGAGTTCTATATTAGCAAGTCGTCCTCGGGTAATGGCATCCCAGAGGCCCCTGTTAATGGCCAGACCTATGTGCGTCAGGATAGCGCTTGGGTGCCAAGAACTATCATCCCAGAGGCCCCTGTTGATGGCCAGACCTATGTGCGTCAGGATAGTACCTGGGTGCCAAAAACTATCATCCCAGAGGCCCCTGTTGACGGCCAGGCTTATGTGCGCCAGAATAGCACCTGGGTGCCAACAACTACAGTTCCTGTCGACATCTCCAATAACGCCCTTGGAGAACTGAGCGACGTCAACGTGCCTACTCCGGACGCTGGCGAGGCCCTGATTTTCAATGGCACCGAGTGGGCTGCTGGTGGCGATTTCAGCGGCGGCAGCTTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
424098baee33ad65520b11b22b418c2657385e60d69f75038682676e77e4285f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50