Protein

View in Explore
Genbank accession
WIR86136.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MEFIVVQGSKTLNLNNRKPLCSVTKAEHRQSLLSEDVINITVESKTPLALQVGNYIEYENRRYTLNSAPKVKKEQGYYAYDLVFEGVQYLLRDKVYFNLDAQGFQNTADFPLTGEINIFLTTLITNINSISDFTWVLGEYPQNTETKTLTFNNENCLAVLQKICQEYDTEFEIKQDLERKSYTLNIKKIGETLNQTFEYGKGNGLYSLSRVNVNDNVITRLYVFGSTNNIKSGYRDYSQRLRLPISHGKEYIQDDAKVKLFGLKEGVKNFDDIKPTFKGIVSGVTNLENGSQEIEVSNMDFDLNETDSNGTKYLLNDTPAKLHINKGNLAGYEFELLKNGGYNHATKTFRVKQFTDERGQKFPEAGSVFSFAVGDEVTLLDIALPEQYITNSENKLLEEGQKEYEKQSVNNLKYNLELDPLYLQQIGDGTSIFFKIGDYIRVIDEPLKIDKTTRIVDITRDLLDEYNYKIGIADTYEISFVASLLTDIKDTKTVIKTQEQINRRNYLNGYRNLQELRESVFDVEGYFDSTHIKPESIEANMLSVGAKSQQFALENISLNPNIEGNPARTFISGGKLVHFSLEDDIREWNLLPYSRNDLLNQVYYVYAKCSRGSSNAMWYITTEQIRFDSRSDYYYFLCYLLYTPKDSKREAEAMYGNVFMHGGQITAGRIKSLNGQTYFDLDSGEIAGTIKFKSGNGYAEVGSAIQQAVDAVSVGGRNLVRESNVFRNGISADGIGSNITSEGYLRVISSISNNNWHTRWYSRTDEIEEQMTEGEAFTITFWVKRLSGYGKPTIYLKDGMGYFYLKGELNNSEFKPLSYTGTWKKAKSLHPHLGWAPANGEFIIKCWKIEKGNKATDWTPAPEDVQAEINAVKAKADQLDNLGTMAWQNSVEKAMLGSTIVQGGYIKTELLNASAIVSNGGGATTSQLNSAISSIVVGGRNYLRGSQKGYGMFNNNGRTWDLTQGEENGVKWISGTSVNNGNFYISTYFHLLNNISVFTEDLTGQETIQSMEVKPTHDMYIGFGENNRKFCPANVWTKIENSPYNNTRFMGIYAIWNNDGSVPATAKIYHRNWKLEKGNKATDWTPAPEDLDTLFANLQQGIANMQTSLSDVKSKTDNFASIQGGLMMANLMSVGSNQANQNAFISGITDEGAMSVRFGAGANYANKHNAPFRVLDNGKVYGSDMEITGGKIARFNISGNTLSGQGIADPNDYLEIKSSGSILSYKKSLSSGRESYALINNDDSILNGNKNNILRLWGRDVNNYTPYNALSIRADGQYATALNIESGDIRVGGEVGYTGELFLGGVWLTIRKGIITNYS
Physico‐chemical
properties
protein length:1319 AA
molecular weight: 147878,72720 Da
isoelectric point:5,53165
aromaticity:0,10842
hydropathy:-0,46914

Domains

Domains [InterPro]
DC_0279
STR
7–927
DC_0279
IPR007119
Unmapped
135–262
IPR007119 DC_1746
WIR86136.1
1 1319
Architecture
STR
STR 7-1182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIR86136.1
1 1319
Domain Start End Length (AA) Confidence
N-terminal 1 729 729 0,9462
Central domain 730 939 211 0,4645
C-terminal 940 1319 379 0,3060
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-729
Central
730-939
C-terminal
940-1319

Taxonomy

  Name Taxonomy ID Lineage
Phage Riemerella phage vB_RanS_CRP12
[NCBI] 		3043503 No lineage information
Host Riemerella anatipestifer
[NCBI] 		34085 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIR86136.1 [NCBI]
Genbank nucleotide accession
OQ834252 [NCBI]
CDS location
range 1757 -> 5716
strand -
CDS
ATGGAGTTTATAGTAGTACAAGGAAGCAAGACCCTTAACCTCAATAATAGAAAGCCTTTATGTTCAGTTACCAAAGCCGAACACAGACAGTCTTTGCTATCAGAAGATGTAATAAACATCACCGTAGAAAGTAAAACTCCTCTTGCTTTGCAAGTGGGCAACTATATAGAATATGAGAACCGAAGATATACACTCAACTCTGCACCAAAGGTAAAAAAGGAGCAAGGGTATTATGCCTATGATTTAGTTTTTGAGGGAGTACAGTATTTATTGAGAGATAAGGTGTATTTCAACTTGGACGCTCAAGGTTTCCAAAATACGGCGGATTTTCCTTTAACGGGAGAAATAAACATTTTCCTTACGACGCTAATCACAAATATCAATTCCATTTCAGATTTTACTTGGGTTTTGGGTGAATATCCACAAAACACGGAAACTAAAACGCTGACTTTTAATAATGAAAACTGTTTAGCGGTTTTACAAAAAATATGTCAGGAATACGATACCGAGTTTGAAATCAAGCAAGATTTAGAGAGAAAATCTTACACGCTCAACATTAAGAAAATAGGCGAAACTTTAAACCAAACCTTTGAATATGGAAAAGGAAATGGGCTTTATTCTTTAAGTAGAGTAAATGTGAATGATAATGTGATTACCCGTCTTTATGTTTTCGGCTCAACGAATAATATTAAAAGCGGATACCGAGATTATTCACAGCGTTTGCGATTGCCTATTTCTCACGGAAAGGAATATATTCAGGACGATGCTAAGGTAAAATTGTTCGGCTTAAAAGAGGGCGTTAAAAATTTTGACGACATCAAACCTACTTTTAAGGGGATAGTATCAGGCGTTACCAATTTGGAAAACGGCTCGCAAGAGATAGAGGTTTCTAATATGGACTTTGACCTGAACGAAACTGACAGCAACGGAACAAAGTATTTATTAAACGATACTCCCGCGAAGCTCCATATAAACAAAGGAAATTTGGCAGGATATGAATTTGAGTTGCTTAAAAACGGAGGATATAACCACGCTACTAAGACTTTTAGAGTAAAGCAATTTACAGACGAAAGAGGACAAAAGTTTCCAGAAGCAGGTTCTGTGTTTTCATTTGCGGTTGGCGATGAGGTTACCTTGTTGGATATTGCTCTACCTGAACAGTACATTACTAATTCCGAAAACAAGCTCCTTGAAGAGGGACAAAAGGAATACGAAAAACAATCGGTAAACAACCTTAAATATAATTTAGAGTTAGACCCTCTGTATCTTCAACAGATAGGTGATGGTACATCTATTTTCTTTAAAATTGGGGATTATATCCGTGTGATAGATGAACCGCTTAAAATAGATAAAACGACACGCATAGTAGATATTACGAGGGACTTATTAGATGAATATAATTACAAAATAGGCATTGCGGACACTTACGAAATCAGCTTTGTAGCAAGTCTGCTTACCGATATTAAAGATACTAAAACGGTTATAAAAACGCAGGAACAAATTAACCGACGAAATTACTTGAACGGTTATCGTAACCTGCAAGAGCTTCGAGAAAGTGTCTTTGATGTAGAGGGTTACTTTGACTCTACACATATCAAGCCAGAGAGTATAGAAGCCAATATGCTTTCGGTTGGAGCAAAGAGCCAACAATTTGCATTAGAAAATATAAGTCTGAATCCTAATATAGAGGGTAATCCTGCAAGAACATTTATTAGTGGTGGGAAGTTGGTTCATTTTTCTTTAGAAGACGATATTAGAGAGTGGAATTTACTACCATACAGCCGTAATGATTTATTGAATCAGGTTTATTACGTTTATGCGAAATGTTCAAGAGGAAGTAGTAATGCGATGTGGTATATCACCACCGAGCAGATAAGGTTTGATAGTCGGTCAGATTATTATTACTTCTTGTGTTACTTACTCTACACACCAAAAGACAGTAAACGAGAAGCAGAAGCAATGTACGGTAATGTATTTATGCACGGAGGGCAAATAACAGCAGGGAGAATTAAATCGCTCAACGGACAAACCTATTTTGATTTGGATAGTGGGGAAATAGCAGGAACGATTAAGTTCAAAAGCGGTAATGGTTATGCGGAAGTTGGGAGTGCTATACAACAAGCGGTGGATGCGGTAAGTGTAGGAGGTAGAAATTTAGTGAGAGAATCCAATGTTTTTAGAAATGGTATATCGGCGGACGGAATAGGTAGTAATATAACTTCAGAAGGATACTTGAGGGTTATTAGCTCAATTTCAAATAACAATTGGCATACAAGATGGTATTCAAGAACAGATGAAATAGAGGAGCAAATGACAGAAGGCGAAGCCTTCACTATTACCTTTTGGGTGAAAAGGTTGAGTGGCTATGGCAAGCCTACTATTTATCTAAAAGATGGAATGGGCTACTTTTATCTGAAAGGCGAATTAAACAACTCCGAATTCAAGCCTCTAAGCTATACAGGAACTTGGAAAAAAGCCAAATCATTACACCCTCATTTAGGTTGGGCACCTGCAAATGGAGAATTTATCATTAAATGTTGGAAAATTGAAAAAGGTAACAAAGCAACAGATTGGACACCCGCTCCCGAAGATGTACAGGCAGAAATTAACGCTGTAAAAGCGAAAGCCGACCAATTGGATAACCTCGGCACAATGGCGTGGCAGAACTCGGTAGAAAAAGCGATGTTGGGTAGTACGATAGTACAAGGGGGGTATATCAAAACAGAACTCTTAAACGCTTCGGCGATAGTGAGTAACGGCGGAGGAGCAACAACCTCACAATTGAATAGTGCCATCAGTTCAATAGTAGTTGGTGGTAGAAATTACCTTAGGGGTTCTCAAAAAGGATACGGAATGTTCAACAACAACGGAAGAACATGGGACTTAACACAGGGAGAGGAAAATGGAGTGAAATGGATTTCTGGAACAAGTGTGAATAATGGTAATTTTTATATTTCTACCTATTTTCATTTACTCAATAATATAAGTGTTTTCACGGAAGACCTCACAGGGCAGGAAACTATCCAATCAATGGAAGTAAAGCCCACTCACGATATGTATATAGGTTTTGGGGAGAATAATAGAAAATTTTGTCCTGCGAATGTTTGGACGAAGATAGAAAATTCTCCATATAACAACACTCGTTTTATGGGCATATATGCGATATGGAATAATGACGGAAGTGTTCCTGCAACTGCAAAAATTTACCACAGAAATTGGAAGTTAGAGAAAGGTAACAAAGCTACCGATTGGACGCCTGCACCAGAGGATTTGGACACACTATTTGCTAACCTGCAACAAGGTATAGCTAATATGCAAACTTCGTTATCTGATGTGAAGAGCAAGACAGATAACTTTGCATCTATCCAAGGTGGTTTGATGATGGCTAACTTAATGTCAGTCGGAAGCAACCAAGCTAATCAAAACGCTTTTATTAGTGGAATAACAGACGAGGGAGCAATGAGCGTGAGGTTTGGAGCAGGAGCTAACTATGCCAATAAACATAACGCCCCGTTTAGGGTGCTGGATAATGGGAAAGTTTATGGCTCTGATATGGAAATTACGGGTGGTAAAATAGCAAGGTTCAATATTAGCGGAAATACACTTTCGGGGCAAGGAATAGCAGACCCAAACGACTATTTAGAAATAAAGTCATCTGGAAGCATACTTTCATATAAAAAAAGTCTTTCATCTGGGAGAGAAAGCTATGCTCTCATCAATAATGATGATAGTATTTTAAACGGAAATAAAAACAATATACTTCGGCTCTGGGGGCGTGATGTGAACAATTATACGCCCTACAACGCCCTATCTATAAGGGCTGACGGACAGTATGCTACTGCCTTAAATATAGAATCGGGAGATATTCGTGTGGGTGGAGAGGTAGGATATACAGGAGAATTATTTTTGGGGGGAGTATGGCTTACCATTAGAAAAGGTATAATAACAAATTATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98719efb938982d5fb3e08f0eeb90e66e041292c76c6ca01a869b5ffa138885d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6785
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50