Protein

View in Explore
Genbank accession
XAI70699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MELKNFYAQDVNGNIVPGAACTVYLQDRVTLATGLKDAAGSDLANPFVADVNGLAQFAAPNGKYFFRCVAGLMDSMIAVQFADPSEIYPLITQAQTAATQAMTAASQAALYNCPSFQSYADLRAFTGTDPVIHVTGQGIEGFFGYNPGTDDNGITVGNYKRLFSGPINVTWFGAIGDNSYDNASAFGYVNAVIGTYKSVYFPPGKYKTSAIWSNSTEGVTLYGDNPWTTSIIQTNLGLGVVSNTAMFFEFRGLCIDYAGTPTASQALYSSGSYSVLDNYLIRRGYDCVLLETGVAQRSTNFNLLNYEFAGIRVRNLNDPFMDNFIINAGDNVKGRDGGIFLEEKVEALMCSNGDVLLGVKSFDSKVTTYGMNTRPAYNKFSNVFFDSAVNGAIFDKMVETDFVDCWWSGGRSSTPTSSQPGATFKTVDSIRVIGGQSFNCGSHGSLVRSMAKNVSFTNHSFESNSATAGDGVADGLNVESGAIGCTIIGGKASNGLYTGKQGYGINVGAACADFSIIGVNLKGNLTGPMLDSSATSVSKTIFGNQGYVTRNKGTGTVIVGQTVVTITHGLSKTPTASDISLSFAGNPTASGVTSLYVAAINSTTFQIVTNTAVVTNALQVSWRADIS
Physico‐chemical
properties
protein length:627 AA
molecular weight: 66275,32320 Da
isoelectric point:5,07478
aromaticity:0,10845
hydropathy:0,02057

Domains

Domains [InterPro]
DC_1436
ATT
1–161
DC_1436 IPR011050
DC_0685
STR
157–210
DC_0685 DC_2234
IPR012334
STR
167–499
IPR012334
XAI70699.1
1 627
Architecture
ATT
STR
RBD
ATT 1-161 | STR 162-558 | RBD 559-625 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAI70699.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 181 181 0,9896
Central domain 182 545 365 0,9949
C-terminal 546 627 81 0,9927
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-181
Central
182-545
C-terminal
546-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Orimi01
[NCBI] 		3138541 No lineage information
Host Pseudomonas syringae
[NCBI] 		317 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAI70699.1 [NCBI]
Genbank nucleotide accession
PP179326.1 [NCBI]
CDS location
range 27802 -> 29685
strand +
CDS
GTGGAACTCAAAAATTTCTATGCTCAAGACGTAAACGGAAACATTGTTCCTGGGGCCGCATGCACTGTATACCTACAAGATAGAGTTACACTAGCTACAGGTCTTAAGGATGCTGCTGGCTCCGATTTAGCAAATCCTTTTGTTGCCGATGTAAATGGCTTGGCTCAGTTTGCTGCACCAAACGGGAAATATTTTTTCCGGTGCGTAGCTGGGCTGATGGACTCGATGATAGCTGTACAGTTTGCCGATCCTTCTGAGATTTACCCTTTAATCACTCAGGCTCAAACTGCTGCAACGCAGGCAATGACAGCCGCAAGTCAAGCGGCATTATATAACTGCCCATCTTTTCAATCATATGCGGATTTAAGGGCATTCACTGGAACAGACCCGGTAATTCATGTTACAGGTCAGGGGATAGAGGGGTTTTTCGGCTACAACCCTGGAACTGACGATAATGGTATAACGGTCGGCAACTACAAAAGATTATTCTCCGGCCCTATAAATGTAACATGGTTCGGTGCAATAGGAGATAATTCATATGATAACGCATCTGCCTTTGGGTATGTAAACGCTGTAATTGGAACTTACAAGTCAGTTTACTTCCCGCCTGGCAAATACAAAACCAGCGCAATATGGTCTAACTCAACAGAAGGAGTTACGCTTTATGGTGACAACCCTTGGACTACCTCAATCATACAAACAAATCTTGGGCTTGGCGTTGTAAGTAATACAGCTATGTTTTTTGAATTCAGAGGTCTTTGTATTGATTACGCCGGTACCCCAACTGCATCGCAGGCGCTTTATTCTTCCGGTAGCTATTCCGTTCTTGATAATTATCTGATCCGTCGTGGATACGACTGCGTTCTTCTTGAGACGGGTGTTGCTCAGAGGTCTACAAACTTTAACCTGCTTAATTATGAGTTTGCAGGAATTCGAGTAAGAAACTTAAATGATCCATTTATGGATAATTTTATTATTAACGCAGGCGATAATGTAAAGGGCCGAGATGGCGGTATATTTCTTGAGGAAAAAGTAGAAGCTTTAATGTGCTCTAATGGAGACGTTTTGCTCGGTGTAAAATCCTTTGATTCAAAAGTAACCACTTACGGAATGAATACCAGGCCTGCATACAATAAGTTCAGTAATGTGTTTTTTGATTCGGCTGTTAACGGTGCTATTTTTGACAAAATGGTGGAGACTGATTTTGTTGACTGCTGGTGGAGTGGAGGAAGATCGTCGACACCTACGTCCTCTCAGCCAGGAGCAACATTCAAGACAGTAGATTCCATAAGGGTTATTGGTGGTCAATCATTCAATTGTGGCAGTCATGGTAGCCTGGTTAGGTCCATGGCAAAAAACGTATCGTTCACAAATCATAGCTTTGAATCAAACAGTGCTACCGCTGGTGATGGAGTTGCTGATGGACTTAATGTTGAGAGTGGAGCAATTGGTTGCACCATTATCGGAGGAAAAGCATCAAACGGCCTGTACACCGGTAAGCAAGGGTACGGTATAAATGTAGGAGCCGCATGTGCTGACTTCAGCATCATAGGGGTAAACCTAAAAGGCAACCTCACAGGTCCAATGCTTGACTCCAGCGCGACTTCGGTTAGCAAAACTATTTTTGGAAATCAAGGATACGTCACAAGAAACAAAGGGACGGGAACAGTCATAGTAGGCCAAACCGTAGTTACGATAACGCACGGTCTTTCAAAAACACCGACAGCATCAGATATTTCGCTATCATTTGCCGGGAACCCAACAGCCAGCGGAGTCACATCTCTTTACGTTGCGGCAATAAATTCCACCACATTTCAGATTGTAACCAATACTGCAGTAGTGACTAATGCGCTTCAGGTTTCATGGAGGGCAGATATCTCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9acf6ecd5ab94b7ede1241265afc41ffd04ba6312a751286fffb8d112fbb3ab3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50