Protein

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Genbank accession
WCD44271.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MKRNPKKQGGFLLNPWRFGGGGPPPGPTGDPLWDQVILLVEASNGFVDRSQMERPLTYAAGATISSVASPVSPNSFELPNARLLVPGGSQAFAFGAEDFTVEMFANLNTGGANGAFFATRANNATVGDRWSCNANGANQALVYADGYKMTSATALAINDYGHLAFVRKGGLGMLFWKGVLIASGWVDNFFSFAESFSVGGLGNNDENLNIRADSIRVTRAARYKANFAPPESLFDHVGPYSDKNLLIAHMTGSVGNQALEDKSHYRRTVGCMGDAQVVAASGLPFGATCVEMSGGGRISVWPPVELESRIFTLQGFVRAKSFTNYSMLYATNYGNGEGGNDKILLFVDAAGTVSFYSNATFIISSSIPIALNTWAHIALVRTPGNVFTLWINGVAAGTAVYNVSFVRRDVTLGANRDNSQSFNGFMLDWSVSGEALYTAPFAVPNTPVADSPGPSLPAPAADPYWANVVLLLQDSMTDQSSYGTVITPHGTCFMEYAYTLFGKRSIKLIGGFLTWVQALPLGTGDWCIEMFVLCEPQGGYKELVSYRASNASGDPNMACFGISPSQELYMYTTGFVTSGPSRYYGRWRHVALVSYAGNVSIYLDGYAVAGPAGNGQPKASINGSLGSNNDGSENHICNYAGVRITVGQARYTGNFDPPENAFPNY
Physico‐chemical
properties
protein length:665 AA
molecular weight: 71083,99960 Da
isoelectric point:5,81874
aromaticity:0,12030
hydropathy:-0,05368

Domains

Domains [InterPro]
DC_2085
STR
25–217
DC_2085 IPR013320 IPR013320
IPR013320
STR
45–222
IPR013320 G3DSA:2.60.120.200 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
87–268
G3DSA:2.60.120.200 PF13385 PF13385
DC_2085
STR
190–428
DC_2085
DC_2085
STR
424–639
DC_2085
WCD44271.1
1 665
Architecture
STR
STR 25-660 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCD44271.1
1 665
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,7482
Central domain 34 257 225 0,6966
C-terminal 258 665 407 0,4583
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-257
C-terminal
258-665

Taxonomy

  Name Taxonomy ID Lineage
Phage Polaromonas phage Tiera
[NCBI] 		3017787 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Polaromonas sp.
[NCBI] 		1869339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD44271.1 [NCBI]
Genbank nucleotide accession
OQ067478 [NCBI]
CDS location
range 9638 -> 11635
strand +
CDS
ATGAAACGCAATCCTAAAAAGCAAGGTGGGTTTCTTCTGAACCCATGGAGATTTGGTGGCGGAGGCCCTCCTCCTGGGCCAACAGGTGATCCTTTGTGGGATCAAGTTATTCTTTTGGTCGAAGCTTCAAATGGTTTCGTTGACCGGAGTCAAATGGAACGCCCCTTGACTTATGCAGCAGGAGCAACAATATCATCTGTGGCAAGTCCAGTATCTCCTAACAGTTTTGAACTTCCTAACGCACGCCTTTTGGTGCCAGGAGGATCTCAGGCTTTTGCTTTTGGTGCAGAAGATTTCACAGTTGAGATGTTTGCTAATTTGAACACAGGAGGTGCTAACGGTGCATTCTTTGCTACCCGAGCGAATAACGCAACTGTAGGAGATCGTTGGAGTTGCAATGCCAACGGTGCTAATCAGGCTTTGGTGTACGCAGACGGTTACAAGATGACCTCTGCCACTGCATTAGCTATCAACGACTATGGTCATTTGGCCTTTGTTCGTAAAGGCGGATTGGGTATGCTATTCTGGAAAGGTGTTTTAATTGCCAGTGGTTGGGTAGATAATTTCTTTAGTTTTGCTGAAAGCTTCTCGGTGGGAGGTTTAGGCAATAACGATGAGAATCTGAACATACGAGCCGACTCTATTCGTGTGACACGAGCTGCACGTTATAAAGCAAACTTCGCACCTCCTGAATCTTTGTTTGATCATGTAGGGCCTTATTCGGATAAGAACCTGCTAATTGCTCATATGACAGGCAGTGTAGGCAACCAAGCTTTAGAGGATAAAAGCCATTACCGCAGGACGGTAGGTTGCATGGGAGATGCCCAGGTAGTTGCAGCCTCTGGTTTGCCTTTTGGAGCTACCTGCGTAGAGATGAGCGGCGGTGGTAGAATTTCTGTGTGGCCACCAGTTGAGCTAGAAAGCCGTATTTTTACATTGCAGGGGTTTGTCCGAGCTAAGTCTTTCACAAACTACTCGATGTTGTATGCCACTAACTATGGCAATGGAGAAGGTGGTAATGATAAGATTCTGCTATTTGTAGATGCGGCAGGAACGGTTTCTTTCTATAGCAATGCTACATTTATCATCTCTTCTTCGATACCAATTGCACTCAACACGTGGGCTCACATTGCCTTAGTGAGAACACCAGGCAATGTGTTTACTCTGTGGATCAATGGAGTAGCAGCTGGTACTGCCGTTTATAACGTATCTTTTGTTCGCAGGGATGTAACTCTGGGAGCTAACCGGGATAACTCACAATCCTTCAATGGATTTATGCTGGATTGGAGTGTATCAGGAGAAGCCCTTTATACAGCTCCTTTTGCTGTACCAAATACTCCTGTAGCAGATTCTCCGGGTCCTTCATTGCCAGCTCCTGCAGCTGATCCATATTGGGCTAATGTTGTTTTGCTGCTGCAAGATTCTATGACAGATCAGAGTTCTTATGGTACTGTGATTACACCCCATGGAACTTGTTTTATGGAGTATGCTTACACCCTGTTTGGCAAGCGCAGCATCAAACTCATAGGGGGTTTTCTAACCTGGGTGCAGGCTCTTCCTCTCGGCACAGGAGATTGGTGTATTGAGATGTTTGTTCTTTGTGAGCCCCAAGGTGGGTACAAGGAGCTGGTAAGTTATCGTGCATCTAATGCTTCAGGTGATCCTAATATGGCTTGTTTTGGTATAAGCCCTAGCCAGGAACTCTACATGTACACAACAGGGTTTGTTACCAGCGGGCCCTCAAGGTACTATGGTCGTTGGAGACATGTTGCATTAGTGTCCTATGCAGGCAATGTAAGTATTTATCTCGATGGGTATGCAGTTGCTGGCCCAGCAGGAAATGGTCAACCTAAAGCTTCTATCAATGGAAGCCTTGGGTCAAACAACGACGGCTCAGAAAACCACATTTGCAATTACGCAGGCGTGCGTATCACAGTCGGACAAGCTCGTTATACAGGCAATTTCGATCCTCCTGAGAATGCTTTTCCAAATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b26261bff9bcca255f86b218fdb743839ff632cef57af56bee29cbb05d6892ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8385
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Three Phages from a Boreal Lake during Ice Cover Infecting Xylophilus, Caulobacter, and Polaromonas Species Laanto,E. and Oksanen,H.M. 2023 — GenBank