Protein

View in Explore
Genbank accession
XDQ84582.1 [GenBank]
Protein name
fibritin neck protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEIIKPVLDDLKYTSDMPVAGSGQKQVEWIKNGEQPQGADPTIVGDKGGVLNRPSTQISANVEILDKNQETILSKMSEVIDKVNIHDDIINAGDGRDLYQRVGDLETEMDVHSGILEDIKETDVILDAKIQSISDNIGVGDPSLRFRTLRADDLHIKKMLGNYKDFDIDGVPSPGSLSSGVKGQIERNYNTGVNLDVRVTSLEKWWEDSTPASLREEVNQIRTELGQDPDPTRNIYSRIGDLEMADETNSPLVQELVEHTGYGEFPLQYLDVQTDSYQTVGNLYDYSLHVKKDVDYISGIAKQTEGLSDDLARSLGSASDSTLDTTAWGRINDLRVRMENNEGILGSSPLDGLQGKVKEVDQREKEHFEDLDGRVSSISTTVNVEYRTSIEDLQNTVGNPNTGLVIKVEGTKNVADDDYRRIGSYQASKDMYEQMYRDYKNGAGYIPNPTETRLGAVWSREYDGANWVWRDLFTTNFVVGDNNKITAIDGTTLVSYSTGSDGKYIPTFGHNGTTKLRIVGDIIGNISLDTTSDIRKYGKTILGSTDQTIKVGQSDKNIVMVGKDIDSFKYNTPTGEFDVLHIGNYKKYITDVNPENGFTLNQNAVIGYAGADVIKLDNTTINIGSANTNLAFKGNVSELVMDQDKAFKMNVGMGKHLNVVNNFGGILTYGDVETTNVFATDLYIQGTGVDRFKVWHQGMDAPADGSFYARKNNQWMVVEQGGSGTGIIGDAPQSGLAYARVNDDGVGFWQAVGERNITLAENVSIMAKTNSGTITAFTVDSATVTTRIGGTTGKINLRGTVSDFKLESKISTSYGSLLESTQTKIVIGDTTTPVNVYSTGNLFVGVGSDAKKVWTDAHDAPNNANFYARKGGQWTLIHDGIDPTKDVSVGETSDFIIGGYNVAKVDTVGVDKLMVIGDSRTFMKFDGKVTNLKLAEVGANNSFGITTQVNNVDKNIISISQPSTEKFIAIGDAGLPVRITASEVTINNDKVLTKDSFEAPADGNKYVRQDGQWTRAYYYGDFATDAPTSPKEGDVFFEFIN
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 113842,00950 Da
isoelectric point:4,70629
aromaticity:0,07877
hydropathy:-0,44102

Domains

Domains [InterPro]
G3DSA:1.20.5.320
STR
6–104
G3DSA:1.20.5.320 DC_0379 G3DSA:6.20.230.10 DC_0730
SSF58046
ATT
10–108
SSF58046 G3DSA:1.20.5.320
XDQ84582.1
1 1041
Architecture
ATT
STR
ATT
STR
ATT 6-108 | STR 109-698 | ATT 699-719 | STR 720-1019 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ84582.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 459 459 0,9508
Central domain 460 748 290 0,6621
C-terminal 749 1041 292 0,4388
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-459
Central
460-748
C-terminal
749-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AdhaM_G2
[NCBI] 		3238786 Uroviricota > Caudoviricetes >
Host Aeromonas dhakensis
[NCBI] 		196024 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ84582.1 [NCBI]
Genbank nucleotide accession
PQ066597 [NCBI]
CDS location
range 135626 -> 138751
strand -
CDS
ATGGAAATTATTAAACCTGTATTGGATGACCTGAAATATACTTCTGATATGCCTGTTGCTGGTTCTGGTCAAAAGCAGGTTGAATGGATTAAAAATGGTGAGCAGCCGCAAGGGGCGGATCCTACTATTGTTGGTGATAAAGGGGGCGTTTTAAACCGTCCCTCTACTCAAATTTCTGCTAACGTAGAGATATTGGATAAAAACCAAGAAACAATCCTTTCTAAGATGTCGGAAGTTATCGACAAGGTGAATATTCATGATGATATAATTAATGCTGGTGACGGACGAGATTTATATCAGCGAGTTGGTGATTTGGAAACCGAAATGGATGTCCATAGTGGGATCCTTGAAGACATCAAAGAAACCGACGTAATCCTCGACGCAAAAATCCAGTCAATTTCCGATAATATCGGAGTTGGCGATCCATCTCTTAGATTCCGAACTCTCCGAGCAGATGACCTTCATATCAAAAAAATGTTGGGTAATTATAAGGATTTTGATATCGATGGTGTTCCATCACCCGGCTCACTTTCTTCTGGGGTGAAAGGTCAGATCGAACGTAACTATAACACTGGTGTCAACCTTGATGTTCGTGTTACTTCTCTTGAAAAATGGTGGGAAGACTCAACTCCTGCATCTTTGAGGGAAGAAGTTAACCAGATTAGAACCGAACTTGGACAAGACCCGGATCCAACAAGGAACATTTATTCTCGTATCGGCGATTTAGAAATGGCCGACGAAACAAATTCACCTTTGGTTCAAGAACTTGTAGAACACACTGGGTACGGTGAATTCCCTCTTCAATACCTTGATGTACAAACAGATTCTTATCAAACAGTAGGTAATCTATACGATTATTCTTTACATGTCAAGAAAGACGTGGATTATATTAGTGGGATCGCCAAACAAACCGAGGGTCTGTCTGATGACTTGGCTCGTTCTCTTGGTTCGGCTAGTGATTCCACACTGGATACCACCGCTTGGGGTAGAATTAATGATCTACGTGTCCGTATGGAGAATAACGAAGGTATTCTAGGATCTAGTCCTTTGGATGGATTGCAGGGAAAAGTTAAAGAAGTAGACCAGAGAGAGAAAGAACATTTCGAAGATCTTGATGGTCGTGTTTCGAGTATATCAACTACTGTTAACGTCGAATATAGAACTTCTATTGAGGATCTACAAAATACCGTAGGTAATCCAAACACAGGTTTGGTTATCAAGGTAGAAGGGACAAAAAACGTCGCTGACGACGATTACCGTAGAATTGGTTCATATCAAGCATCGAAAGATATGTATGAACAGATGTACCGTGATTATAAAAATGGTGCTGGTTATATCCCTAACCCAACAGAAACTAGGCTTGGTGCTGTATGGTCGCGAGAATATGATGGTGCTAACTGGGTATGGCGAGATTTGTTTACCACTAACTTTGTGGTTGGTGATAACAATAAGATTACCGCCATCGACGGAACCACCCTTGTTTCTTATTCTACTGGTTCTGATGGGAAATATATCCCGACCTTTGGTCATAACGGAACAACCAAACTCCGTATAGTCGGCGACATTATCGGAAATATTTCTCTTGATACAACCTCTGATATCAGAAAATATGGGAAAACTATTCTTGGCTCTACCGATCAAACTATAAAAGTTGGTCAGAGTGATAAGAATATAGTTATGGTTGGTAAGGATATCGATTCTTTCAAGTATAACACACCAACCGGTGAATTTGATGTTCTTCATATTGGGAACTACAAAAAATATATCACCGACGTTAACCCAGAGAATGGATTTACCCTAAACCAGAATGCGGTAATTGGTTATGCAGGCGCAGATGTTATTAAATTAGATAACACTACAATAAATATTGGTTCTGCTAATACAAACCTCGCGTTTAAGGGAAATGTCAGCGAATTGGTCATGGACCAAGACAAAGCGTTTAAGATGAATGTTGGTATGGGTAAACATCTAAACGTGGTCAATAACTTTGGTGGAATATTGACATATGGTGATGTTGAAACTACTAACGTATTTGCAACGGATCTTTATATTCAAGGTACTGGGGTAGACCGGTTTAAGGTTTGGCACCAAGGTATGGACGCACCCGCAGATGGTAGTTTTTACGCTCGTAAGAACAACCAATGGATGGTCGTTGAACAGGGTGGTTCTGGTACTGGTATTATCGGTGATGCACCACAATCCGGATTGGCATACGCTCGGGTAAATGACGACGGTGTTGGTTTCTGGCAAGCCGTAGGCGAAAGGAATATAACCCTAGCAGAAAACGTATCTATAATGGCAAAAACCAATAGTGGTACTATTACTGCATTTACCGTTGACTCTGCAACCGTGACAACTAGGATTGGTGGAACCACAGGGAAAATAAACCTTCGTGGTACTGTATCCGATTTCAAATTAGAAAGTAAAATTTCTACATCTTATGGTTCTCTTTTAGAAAGTACCCAAACCAAAATAGTGATCGGCGACACAACAACACCAGTGAATGTATATTCTACTGGTAATCTGTTTGTTGGTGTTGGTTCTGATGCTAAGAAAGTTTGGACAGACGCACATGACGCACCAAACAACGCGAATTTCTACGCTCGTAAGGGTGGGCAATGGACTCTAATCCATGACGGTATAGACCCAACCAAGGATGTTTCTGTTGGTGAAACCAGCGATTTCATCATTGGTGGATATAACGTAGCCAAGGTGGATACAGTTGGTGTTGATAAGCTAATGGTTATTGGTGATAGTAGAACGTTCATGAAGTTTGACGGTAAGGTAACTAACCTCAAGCTTGCAGAAGTAGGTGCCAATAATAGTTTCGGTATTACCACACAGGTAAATAATGTCGATAAGAACATAATTAGTATATCGCAACCTTCTACAGAAAAGTTTATCGCAATTGGTGACGCCGGTCTACCGGTTCGTATTACCGCATCTGAGGTAACAATCAATAACGATAAAGTCCTCACAAAGGATAGTTTCGAAGCACCAGCAGACGGAAACAAGTACGTAAGACAAGATGGTCAGTGGACAAGAGCGTATTACTACGGTGATTTTGCTACAGACGCACCGACCAGTCCTAAAGAAGGTGATGTGTTCTTCGAATTCATCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
740323d863a8d26aab14acd842cc00ad8000802cd42937806e09b3fa272bc476
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2947
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Aeromonas dhakensis bacteriophages Ansari,F., Tyagi,A., Shashidhar,R. and Nagar,V. 2026-04 — GenBank