Protein

View in Explore
Genbank accession
CAM0050434.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 0,92
Protein sequence
MQREIPLAANTSEQDISGNELLVNVYPRASTGGKYPFNLINTPGLAFFCELPTFPVLGLHNNKGRVFAVTPSKMYEIFKNGTFKELGDVDLKGRVSMEDNGIQVVVVDGFKGFYYDANTEEVLQITHEAFYPASTVTYQDGYFLFDRKGTGQFFISELLNVDFDPLDFATAEGQPDNLVAILSDHREIFLFGTETIEVWYNSGASDFPFERNQGAFVEKGCGARYSVAKQNNTVYFIGSDLMVYQMTGYTPVRISTHAVEKTLKDVDLNDAFAYTYQDEGHLFYVLTIPSRDITWCYDISTGAWHIRQSYQFGRHQSNNAIFFDSKTLVGDFQNGRIYQMAGNFYTDDGEPVVREFVLPTVNNGREFLTVDSLEFDMGTGVGLIRGQGDDPELRVYFSKDSGKTYSESFKRGRIGKVGEYLTRAKVNRFGAARQFTFKVEISDPIPIDIGGAWIEVR
Physico‐chemical
properties
protein length:457 AA
molecular weight: 51514,05360 Da
isoelectric point:4,89039
aromaticity:0,14004
hydropathy:-0,28512

Domains

Domains [InterPro]
DC_1784
STR
4–457
DC_1784
IPR021098
STR
19–456
IPR021098
CAM0050434.1
1 457
Architecture
STR
STR 4-457
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0050434.1
1 457
Domain Start End Length (AA) Confidence
N-terminal 1 445 445 0,8431
Central domain 446 446 2 0,0040
C-terminal 447 457 10 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-445
Central
446-446
C-terminal
447-457

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D478
[NCBI] 		3105241 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0050434.1 [NCBI]
Genbank nucleotide accession
OZ196413 [NCBI]
CDS location
range 8247 -> 9620
strand +
CDS
ATGCAAAGAGAGATACCGCTTGCGGCTAACACTTCAGAGCAGGACATATCAGGTAATGAGTTACTTGTTAATGTGTACCCTCGCGCCTCTACTGGTGGTAAGTATCCATTCAATCTAATCAATACGCCTGGGCTCGCATTCTTTTGCGAGCTTCCTACGTTTCCGGTGCTTGGGCTTCATAATAATAAAGGTCGAGTATTTGCTGTTACGCCTTCAAAGATGTACGAAATATTTAAGAATGGAACCTTTAAAGAGCTAGGCGATGTTGACCTTAAAGGGCGTGTCTCTATGGAGGATAACGGTATTCAGGTTGTTGTGGTTGATGGATTCAAGGGATTCTATTATGACGCTAACACAGAAGAAGTTTTACAGATAACACACGAAGCATTCTACCCGGCCTCAACAGTTACCTACCAGGATGGTTATTTTTTATTTGACCGTAAGGGTACGGGGCAGTTCTTTATATCTGAGTTGCTTAATGTTGATTTTGATCCGTTAGACTTTGCAACTGCTGAGGGCCAGCCTGATAACCTTGTTGCAATACTTAGCGATCACCGTGAAATATTCCTATTCGGCACTGAAACGATTGAGGTCTGGTATAACTCCGGTGCTTCTGATTTTCCTTTTGAGCGAAACCAAGGCGCTTTTGTTGAGAAAGGGTGCGGCGCTCGTTATTCAGTGGCAAAGCAAAATAACACTGTTTACTTTATTGGTTCTGACCTAATGGTTTATCAAATGACTGGCTACACTCCGGTAAGGATAAGCACTCACGCAGTAGAAAAGACACTTAAAGACGTTGATTTAAATGATGCGTTTGCCTACACGTACCAGGATGAAGGCCATTTGTTCTACGTTCTAACTATTCCAAGTCGAGATATTACCTGGTGTTATGATATTTCAACTGGTGCATGGCATATACGCCAGTCTTATCAGTTTGGTCGCCACCAGTCTAACAACGCGATCTTCTTTGATTCAAAAACTTTGGTAGGTGACTTTCAGAATGGTCGAATCTATCAAATGGCTGGCAACTTCTATACCGATGACGGTGAGCCCGTTGTTCGTGAGTTTGTTTTGCCTACCGTCAATAATGGCCGAGAGTTCTTAACTGTTGATAGCTTAGAGTTTGATATGGGTACTGGTGTCGGGCTTATTCGTGGTCAAGGTGATGATCCAGAGTTGCGCGTTTACTTCTCAAAGGATTCAGGAAAGACATACAGTGAAAGCTTTAAGCGTGGCCGTATTGGTAAGGTAGGCGAATACCTAACAAGGGCTAAGGTTAATCGATTTGGTGCTGCTAGACAATTCACCTTTAAGGTTGAAATATCAGACCCTATACCGATTGATATTGGTGGCGCTTGGATCGAGGTGCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ae15b03e72807a3d4d5e1ee635440e0ef1d94e7bfd630d532b5b0085f330fdd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8960
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50