Protein

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Genbank accession
BAV80922.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MTAEVGDKIFIFGQNTGTDNDEPVIQYNDDEQRQQQTSTPTNPPTDDRDILTYYDYKALSGKRAVEWDAGSLLVIEEDTVVYIGTRSDTDENTGGVLEMRASTASVEIVFFSDIGYGDRSVDINTFHNTPTFEVHAAFSNTANDEPLVDTDTSDPDPANHTTQNYKNFTFNYPVLHLGKLTISRDLVAPDEYSVVQEYSGITSRGLYTGTNAVTYTLGINADEAYRAEHGTDAFLWENGQSISVGLTSDNQTAAQIFVAPTVVNGHVHFTSDVRAEQGNPITLWLPTEQDGHNSTYDAGDSDTGAEHSYAKVTIRGINESNYGQLWFDRDDFTGVYRFSILSAEGYRSWEKTLSRTVPNNEYEIDFEPNRIITNSTAGHQHFREWGDDFDVTIDMAGVDTTNLLYFYGVTKMRAKYIFRDDSSQRLRMYFLNGNYANDDDQQLIYFDCYAELREAGEAWWEFEITQDGDVLRLWATNMENGYRREVPTNSTFLIDEAISDPNVDSRTGRILINRDDRHYMVNALQTNTSNFYYVMRGVRHFYMTDYNVNRDRDLYLRLQRHDGTYKQLQIISHGKEIPLEFIRSGDTTDDDWIVREPNGTLHTIDMGNTTSASFSTTSVPVDLFEMKQGSNNSALGSFTEANSGAYSVEMKAPFEKGIVVHNAITSQGSPESTTELSGLILTDEDTSSSPTNSTAANQIGVALHLTDSSGDFGFSKFRRFAYRIDDEVRTVEQVAPVLSIKETYDSENSDGDDHSVDSDCRLEFYGEEIRWYNKGDDYQLGESNSPSNDYAYFRFNNSTSDSSKNILIGTNTIHSSSDYLGAIRFAPNNDVCLEIVDTTGTGTFYGLSHSASSNAFLVPTTNASSSNRTYLGGSTRRFRKYFGNASSDISSDTRIKKNIEDIPEELYEVWHDYVVPKSYNLTDELDEESRHVGVLAQDVIRAFEAAGVDWRYYGVVTESLEKHKGFEDDELGQLSVSYEAINLIGNAAMLYKLKKAGIL
Physico‐chemical
properties
protein length:999 AA
molecular weight: 112286,93690 Da
isoelectric point:4,50650
aromaticity:0,11111
hydropathy:-0,58779

Domains

Domains [InterPro]
DC_0152
STR
7–993
DC_0152
IPR036388
RBD
891–993
IPR036388
IPR030392
CHP
891–947
IPR030392
IPR030392
CHP
891–999
IPR030392
BAV80922.1
1 999
Architecture
STR
STR 7-999
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BAV80922.1
1 999
Domain Start End Length (AA) Confidence
N-terminal 1 355 355 0,0018
Central domain 356 554 200 0,3199
C-terminal 555 999 444 0,9175
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-355
Central
356-554
C-terminal
555-999

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage RYC
[NCBI] 		1653734 No lineage information
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAV80922.1 [NCBI]
Genbank nucleotide accession
AP014858.1 [NCBI]
CDS location
range 81118 -> 84117
strand +
CDS
ATGACAGCAGAAGTCGGTGATAAAATCTTTATCTTCGGTCAAAACACCGGAACAGATAACGACGAACCTGTAATACAGTATAACGATGACGAACAACGTCAACAACAAACATCAACACCTACTAATCCTCCTACAGATGATCGTGATATCCTTACATACTACGATTACAAGGCTCTTAGTGGTAAACGTGCAGTAGAGTGGGACGCAGGAAGTCTTCTTGTTATCGAAGAAGATACTGTTGTGTATATTGGTACAAGGTCTGATACCGATGAAAATACAGGCGGTGTATTAGAGATGAGGGCATCTACTGCGTCTGTAGAGATTGTGTTCTTCTCTGACATAGGTTATGGTGATCGAAGTGTAGATATAAATACCTTCCACAATACCCCTACTTTTGAAGTACATGCTGCATTCTCCAATACCGCCAACGACGAACCTTTAGTGGATACGGACACCTCTGATCCCGATCCTGCCAATCACACTACACAGAACTACAAGAACTTTACGTTCAATTACCCTGTACTTCATCTGGGTAAGTTAACTATATCTCGTGATCTAGTAGCACCTGATGAGTATTCTGTTGTACAAGAGTATAGTGGTATAACTTCAAGAGGTCTTTATACAGGAACTAATGCTGTAACATACACTTTAGGGATTAATGCTGATGAAGCATACCGAGCAGAACACGGCACTGATGCATTTTTATGGGAAAACGGGCAATCTATCTCTGTAGGCTTAACTTCTGATAACCAAACTGCTGCCCAAATTTTTGTAGCACCTACTGTTGTTAATGGTCATGTACACTTTACTAGTGATGTTAGAGCAGAACAAGGTAATCCTATCACCCTATGGTTACCTACAGAACAAGATGGACATAATTCTACCTACGATGCGGGAGATTCTGACACAGGTGCGGAACACTCCTACGCTAAAGTCACAATAAGAGGTATTAATGAAAGTAACTATGGGCAGTTGTGGTTTGACCGTGACGATTTCACAGGTGTTTATAGATTCTCTATATTAAGTGCAGAAGGGTATAGATCTTGGGAGAAAACATTATCAAGAACTGTCCCTAATAATGAATATGAGATAGATTTCGAACCTAATCGTATAATCACTAATAGTACCGCAGGTCATCAACATTTCAGAGAATGGGGTGATGATTTCGACGTAACTATCGATATGGCGGGCGTAGATACTACAAACTTGTTATACTTCTATGGTGTAACTAAGATGAGAGCTAAGTACATATTCAGAGATGACTCTAGTCAACGACTTCGTATGTACTTCTTAAACGGTAACTATGCTAATGATGATGATCAACAATTAATCTACTTTGACTGTTATGCAGAATTACGTGAGGCAGGAGAAGCTTGGTGGGAATTTGAGATAACACAAGATGGCGATGTTCTACGTCTTTGGGCTACCAATATGGAGAACGGTTATCGTAGAGAAGTTCCTACTAACTCTACATTCCTGATCGATGAAGCTATATCTGACCCTAATGTAGATTCTCGTACTGGACGTATTCTTATAAACCGTGATGATAGACATTACATGGTTAATGCCTTACAGACTAATACTAGTAATTTCTACTATGTAATGCGCGGCGTTCGTCATTTTTATATGACAGATTATAATGTAAACCGTGATCGGGATTTATATTTAAGACTACAACGTCATGATGGTACTTATAAGCAATTACAGATCATTTCACATGGTAAAGAGATTCCACTAGAGTTCATACGTAGTGGAGATACCACTGATGATGATTGGATCGTAAGAGAACCTAACGGAACTTTGCACACGATCGATATGGGTAACACTACTTCTGCTAGTTTCTCTACAACGAGTGTTCCTGTAGACTTGTTTGAAATGAAACAAGGTAGTAATAACTCTGCACTAGGTTCCTTCACCGAAGCTAATAGTGGAGCTTACTCTGTAGAAATGAAAGCACCTTTTGAGAAAGGAATTGTAGTACATAATGCAATCACTTCTCAAGGTTCTCCGGAATCTACTACAGAACTTTCAGGATTAATACTCACAGATGAAGATACTAGTTCTTCTCCTACAAACTCTACCGCAGCTAATCAAATAGGTGTAGCACTTCATCTAACAGATAGTTCAGGCGATTTTGGGTTTAGTAAGTTTCGTAGATTTGCTTATAGGATAGATGATGAAGTACGTACTGTAGAACAAGTAGCACCTGTTCTTTCAATCAAAGAGACGTATGACTCAGAAAATAGTGATGGTGATGACCATTCTGTGGATTCAGATTGTAGATTAGAGTTTTACGGAGAAGAAATACGGTGGTACAATAAAGGAGATGATTACCAATTAGGTGAATCTAACAGTCCTAGTAACGACTATGCATACTTTAGATTCAATAATTCTACTTCTGATAGTAGTAAAAATATCTTAATAGGTACTAATACCATACACTCCTCTAGTGACTACTTAGGTGCTATTAGGTTTGCCCCTAATAATGATGTTTGTCTAGAAATCGTAGATACTACAGGTACTGGTACTTTCTATGGACTATCTCATAGTGCATCTAGTAATGCATTTTTAGTCCCAACAACTAATGCTTCAAGTTCTAATAGGACATATTTAGGGGGTAGTACTAGACGTTTCAGGAAGTACTTTGGTAATGCTTCTAGTGATATTAGTTCTGATACACGTATCAAGAAGAATATTGAAGATATACCTGAAGAATTGTACGAGGTATGGCACGATTACGTTGTTCCTAAATCCTATAATCTTACTGATGAATTAGATGAAGAAAGTAGACATGTAGGGGTTCTAGCTCAAGATGTTATAAGAGCTTTTGAAGCGGCGGGTGTTGATTGGAGATATTATGGGGTTGTTACTGAATCTTTAGAAAAACATAAAGGGTTTGAAGATGATGAACTAGGACAACTTTCAGTATCTTATGAGGCAATAAACCTTATAGGTAATGCTGCCATGTTATATAAACTTAAAAAGGCAGGTATCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8cdac83433dd61c6cb9eead0c81c2a8f2f9401202c01815c625a46a5969a611
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3233
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50