Protein

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Genbank accession
XOD33701.1 [GenBank]
Protein name
tip attachment protein J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
Protein sequence
MIKIIYKQDPLSEDKTIEHAETLGQWLTSKYDHMPEHVRIFHTTSNMDHAEISFANEVTPKNAYELKQLDFLPGTFIVIENPKGMDPITLAWIVVASIVMGVAVALLMPVPSITQTNQNNNQSSSANNELSNRENKTRVNGRIADIYGAAHDTPDLITVPYKVYENNVEVEHVVGCIGRGHYKINGAYDGETNIVDIAGASVEVFRPGVDIVSGEPYFSLGTEITTPPLTVQHQNSVNGQILRPADTQSLEGTNYLLFAYPNEILRASANNTDLTTKFVSNDRVEITNASFTFNGQTYDLNGTYSVLSVADDRMALSNPAAVNSNWLKLKELSNQQTTALSPKISSIGEKWIGPFILDNVERSRVLCNFVATNGLYTVSAGGNQAAVNVTIEVEVTPVNESGAAIGNPMLKQIILKGSAKSRQTVGATLDFVTFQGRCSVRARRLTPTPAVTTVVDEVKWQALYGAYPLQSTVYEHETVFRARTYATTGALSVKSRKINFDLQRMLPTFKNGAMTTELFPTSSFADALVSMALDDKIGRRTIDEIDLENIYRTYNDVVDYFGTPLAAEFCTTIDDTNLSFEELVTNLCDAVFCTAYRQNNKLKLYFERPTDNSVMLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVGVRNKWQAHFNAYRIWNKLRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQEGLILTLSHDVDFIAGKSYVIYLQMGDGTVDLIPVTAGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLFQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKFDYKSSPAKREYIVPAATELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAYGDWEKDSDFNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGAGAPFGRVMTGQPITNDSQDWRWYLNGDFMVVKVTDAEASVPGKGYRTQNDRYGSPLSGDGGNWGQRGTKSTNDGTWNWQYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126361,37060 Da
isoelectric point:5,22591
aromaticity:0,09321
hydropathy:-0,29852

Domains

Domains [InterPro]
DC_0118
STR
1–690
DC_0118 DC_0808
NF040662
Unmapped
360–838
NF040662
XOD33701.1
1 1148
Architecture
STR
RBD
STR 1-690 | RBD 706-920 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD33701.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,9226
Central domain 246 444 200 0,6674
C-terminal 445 1148 703 0,0861
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-245
Central
246-444
C-terminal
445-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage PhabP_R1
[NCBI] 		3378228 Viruses >
Host Acinetobacter baumannii ATCC 17978
[NCBI] 		400667 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii ATCC 17978

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD33701.1 [NCBI]
Genbank nucleotide accession
PQ568402.1 [NCBI]
CDS location
range 27831 -> 31277
strand -
CDS
ATGATTAAGATTATTTATAAACAAGACCCTTTATCCGAAGACAAAACAATTGAACACGCCGAAACTTTGGGTCAATGGCTTACTTCAAAATATGACCATATGCCTGAGCATGTCCGTATTTTTCATACCACAAGCAATATGGATCATGCAGAAATTTCATTTGCGAATGAAGTCACGCCGAAGAATGCATATGAATTAAAGCAGCTCGATTTCTTGCCAGGCACTTTCATTGTAATTGAGAATCCCAAGGGTATGGACCCCATAACTCTAGCTTGGATAGTGGTTGCCTCTATAGTTATGGGTGTGGCTGTTGCATTATTAATGCCAGTACCATCAATTACCCAAACCAACCAGAATAACAATCAATCCTCGTCTGCAAATAACGAATTATCAAACCGTGAAAATAAAACTCGCGTAAATGGTCGTATTGCTGATATTTATGGTGCCGCTCACGATACCCCTGATCTGATTACTGTGCCTTACAAGGTATATGAAAACAATGTCGAAGTAGAGCATGTTGTTGGTTGTATTGGTCGTGGTCACTATAAAATTAACGGTGCATATGACGGTGAAACCAACATTGTTGATATTGCCGGCGCATCGGTAGAAGTCTTTCGACCAGGTGTAGATATTGTTTCAGGTGAGCCATATTTTTCGCTTGGTACCGAAATTACCACGCCCCCACTAACGGTTCAGCATCAAAACTCGGTGAATGGCCAGATCTTGCGTCCGGCAGATACTCAAAGCTTGGAAGGTACCAACTATCTTCTTTTTGCATATCCAAATGAGATCTTGCGTGCATCTGCAAACAATACTGATTTAACCACTAAGTTTGTTAGTAATGACCGGGTAGAAATCACAAATGCTTCGTTTACTTTTAACGGCCAGACTTATGATTTAAACGGTACATATAGCGTTCTATCGGTAGCTGATGACCGTATGGCATTGTCTAATCCGGCTGCGGTAAACTCCAACTGGTTAAAGCTTAAAGAGTTAAGTAACCAACAAACAACAGCTTTATCACCAAAGATAAGTTCAATAGGTGAAAAGTGGATTGGTCCTTTCATTCTGGACAATGTTGAACGTAGCCGGGTGCTGTGTAATTTTGTGGCCACAAATGGACTTTATACCGTTTCAGCAGGTGGGAATCAGGCCGCTGTTAACGTCACGATTGAAGTTGAAGTAACGCCGGTTAATGAATCTGGTGCAGCTATTGGTAATCCAATGCTGAAGCAGATCATTTTGAAAGGCTCGGCAAAGTCACGTCAGACAGTTGGTGCAACGCTGGATTTTGTGACATTTCAGGGTCGCTGTAGTGTCCGTGCACGTCGTTTAACACCAACACCGGCGGTTACAACGGTAGTAGATGAAGTAAAGTGGCAGGCGCTTTATGGTGCTTATCCTTTGCAAAGCACAGTGTATGAACATGAAACGGTTTTTCGTGCGCGCACTTATGCAACCACTGGAGCTTTATCTGTTAAGTCCCGCAAGATCAATTTTGATCTTCAGCGGATGTTACCGACTTTTAAAAACGGCGCAATGACGACAGAGCTATTTCCAACATCAAGCTTTGCTGATGCATTGGTTTCAATGGCACTGGATGACAAGATAGGCCGCCGTACGATCGACGAAATAGATCTGGAAAATATCTATCGGACTTATAACGATGTAGTTGATTATTTTGGTACACCACTTGCGGCTGAGTTCTGTACTACGATTGATGATACAAACCTGTCTTTTGAAGAGCTGGTCACCAATCTTTGTGATGCTGTATTTTGTACCGCATATCGGCAAAACAATAAGCTCAAGCTTTACTTTGAACGTCCAACTGATAACTCGGTAATGCTGTTTAACTTCAGGAATATCATTCCGGATAGTTACAAGCATGACCTTACCTTTGGCGTGATGGATGACTACGATGGACTGATCTATGAATACACGGATCCGACCGACGATAGTCGTATCAATATCTACTTGCCGGACAAAGGAGCGAAGAACCCGAAAGAAGTGAAATCCGTTGGTGTGCGAAACAAGTGGCAAGCTCATTTTAATGCGTACCGGATCTGGAACAAGCTTCGGTTTCAACGTAAATCCATCACCTTTGATGCGGCGCCTGAGTCTGAATTGCTTGTGCTACGTGACCGTATTGCCGTAGCAGATTATCGCAATGGTATTCATCAAAGTGGGGAAGTGGTACAGCAAGAGGGTTTAATCCTCACCTTAAGCCATGATGTAGATTTCATTGCAGGCAAGAGCTATGTGATCTATCTGCAAATGGGGGATGGCACAGTGGACCTTATTCCTGTTACCGCTGGATCTGCCAAGAACAAGGTGGTTTTAGGCCGTTTACCGAACGGGGCCTTAAAGCTTAGTCCTGATGATTTTGTGAATACTATCTATACGGTGGTTAATGACGATACCAAAGGCTCATTGCCTTATCTGGTTGCAAAAAGAGAACCGGCTGACCAGTTCTCTAATACCATTACTGCAATTAATTACGATGAACGTTATTACCTCAATGACAAGGACTTTATTGATGTGCCAGTAGATGATTCACCGATTTACATTCGATATGACCAGCTAGATATAAATCTGGCACGTTTATTTCAAATGCAAAGAGGTGATTTACCAACGACTGGCGAAATCAGTTTTGTAGTTGAAGCTGGTGCGCTGGTTTCAAGCTCAAGTTCTTATCGACCGGAAACCAGATTTGTCTATAAATTCGACTATAAGTCTAGTCCTGCAAAACGAGAGTATATCGTTCCTGCTGCAACTGAATTACCAGCGATAGATACAGGGGAGTTCCCACCTGATCTGGTGGTAAATCTGACTATTAAAGGTGCTGTTGTTGGACGTGGTGGAGATGGCGGTTTGCCACATCTAGCTTACGGAGATTGGGAAAAAGATTCTGACTTCAATTTTACCAAAACCCGCCGTGATGGTTTTCAGGGAGCACCCGGTCTATTAAACCGGCACAGTAAACTAAACCTGATTATTGATGGTGGAACTCTGGCTCGAGGCGGCTCAGGTGGTGGAGCAACACCAAGCGGTATTTATACAGGATTATCGTATGGAGTTCAGGGTATTCCCGGTGGAGCTGGAGCACCTTTTGGTCGGGTTATGACCGGACAACCTATTACTAACGATTCACAAGACTGGCGTTGGTACTTAAATGGTGACTTTATGGTTGTCAAAGTAACCGATGCCGAAGCTTCGGTACCCGGTAAAGGTTACCGAACCCAAAATGATCGTTATGGATCTCCATTATCAGGTGATGGCGGAAATTGGGGCCAACGTGGTACCAAGTCTACTAATGATGGAACATGGAATTGGCAATACCATGGCACAACTGAAGGTCAGCCGGGGCCGGGTGGACCTGCAATTGTGGGAGTTGCACCACTGACAACTCAATTGATTAACGGAGGGAAAATCTTACAAACCCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e704b7d6fd027563d4b061019abbe809cf0c75ff1481669d47bbdb6cc5680c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7492
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50