Protein

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Genbank accession
XUY71027.1 [GenBank]
Protein name
baseplate hub subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQRPGFPNVSIKLYQDYEAFLENRFVELGATFITMTLRDSLRGVNEGLLQIYDSKALHTKLAGTEIIQISLSTANTEQVFNRIYGIAHSNVTVDSKADNIITFQLKSYHETLNLKFSRATDTNAVNNITSMIDAIYKNVPLWKPAITGVNVFIPKCPWVNTVNDYFEYVRTHGQSVDNESFVYCWEDFDGIKITDHKLLMQGDPIPAIVTEPTLTGQFMDMSEYLMVFNFEWDTKSNAVTKNSFANVTYTTIDFITKQYNKIVVGNGDNIAHFAHGGAYGNLTYKNAYLEGSKLATFGQFDSYASAVCHGNFSLRPAQKLRFFDAKQQIRTDFIVDEVVHEICREQSLTHIHMFSHSEILKDVQFEGKI
Physico‐chemical
properties
protein length:369 AA
molecular weight: 41955,97060 Da
isoelectric point:5,73314
aromaticity:0,12195
hydropathy:-0,20596

Domains

Domains [InterPro]
SSF69279
STR
1–196
SSF69279 SSF69279
IPR043504
Unmapped
1–111
IPR043504 IPR043085 IPR015180
SSF69279
STR
1–210
SSF69279 SSF69279
IPR015181
ATT
2–195
IPR015181 IPR043083
IPR043084
Unmapped
245–364
IPR043084
XUY71027.1
1 369
Architecture
ATT
ATT 1-368 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUY71027.1
1 369
Domain Start End Length (AA) Confidence
N-terminal 1 125 125 0,5924
Central domain 126 324 200 0,0658
C-terminal 325 369 44 0,8731
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-125
Central
126-324
C-terminal
325-369

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_PTE-Eco09
[NCBI] 		3394184 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUY71027.1 [NCBI]
Genbank nucleotide accession
PQ306574 [NCBI]
CDS location
range 144174 -> 145283
strand -
CDS
ATGCAAAGACCCGGATTTCCTAACGTCTCTATAAAGCTATATCAAGATTATGAAGCATTTTTGGAAAATAGATTTGTTGAATTGGGTGCTACCTTCATTACAATGACATTACGTGATTCTCTTCGTGGTGTCAATGAAGGATTGTTACAAATATATGATTCTAAGGCGCTTCATACGAAATTAGCAGGAACAGAGATTATACAAATTTCATTATCAACGGCTAATACTGAACAAGTATTCAACCGGATATATGGTATCGCGCATAGTAATGTGACGGTTGACTCTAAGGCCGATAATATAATAACCTTCCAGTTAAAGAGCTACCATGAAACGCTGAATCTAAAGTTTTCTCGCGCTACCGACACTAACGCGGTGAATAACATCACCAGTATGATAGACGCGATCTATAAAAATGTTCCATTGTGGAAACCTGCCATTACGGGAGTAAACGTATTCATTCCTAAGTGTCCGTGGGTGAACACCGTTAACGATTATTTTGAATATGTGAGAACGCATGGTCAGAGTGTAGACAACGAATCGTTCGTTTATTGTTGGGAGGACTTTGACGGGATCAAGATCACCGATCATAAACTACTGATGCAGGGTGATCCAATTCCTGCTATCGTCACCGAGCCTACCCTAACAGGACAATTCATGGATATGAGCGAATATTTGATGGTGTTTAACTTTGAGTGGGATACTAAGAGTAATGCGGTAACAAAAAACTCATTCGCTAATGTCACTTACACAACAATTGATTTCATCACGAAGCAGTATAACAAGATTGTAGTGGGTAATGGTGATAACATAGCTCATTTTGCTCATGGTGGCGCTTATGGTAATTTGACATATAAAAACGCGTATCTTGAAGGTTCTAAACTGGCAACTTTTGGACAATTTGATTCCTATGCCAGCGCGGTGTGTCATGGTAATTTCTCTCTACGTCCAGCACAAAAGCTAAGATTCTTTGATGCTAAACAGCAAATTCGCACCGATTTTATTGTCGATGAAGTTGTTCATGAAATTTGTCGAGAACAATCATTAACACATATTCACATGTTTAGTCATAGTGAGATTTTGAAAGATGTACAATTTGAAGGTAAAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d748ea0be92b96aef09da139d52d3018479d57b18701f0ca7c820805024f70a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50