Protein

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Genbank accession
YP_009621073.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MLYSLMRESRVVIEYDGRAYGFDALSDYTAGTSYEEFKANRRTIHRRSNYAYSKITAQSPSSISLTLNFSSNALEGLFFELMGFIEVDGMYQMPLFSNNIEPKMFSVYIINKNTSLRFDNCFATTCDFSLDKSVPVLNVGIESGYFEEVGHPLNSYTLDQGEVLPFSLPQVSSKGRVLPGLMSAGMSFQQQCEWRGDRSLFDINKIYNNRRAIVNELNSSALISMYYAKSLQIDSTHNIKPDMGLPVQIRNKYIVVDFPSTKITKRLDLTDVYKIDYDVVPTEQSDPVRIKLIGD
Physico‐chemical
properties
protein length:295 AA
molecular weight: 33549,72740 Da
isoelectric point:5,53648
aromaticity:0,11525
hydropathy:-0,24678

Domains

Domains [InterPro]
IPR056389
ATT
1–294
IPR056389
YP_009621073.1
1 295
Architecture
ATT
ATT 1-294 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009621073.1
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 286 286 0,7164
Central domain 287 286 1 0,5198
C-terminal 287 295 8 0,6589
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-286
Central
287-286
C-terminal
287-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Sugarland
[NCBI] 		2053603 Uroviricota > Caudoviricetes > Demerecviridae > Sugarlandvirus sugarland >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009621073.1 [NCBI]
Genbank nucleotide accession
NC_042093 [NCBI]
CDS location
range 97177 -> 98064
strand -
CDS
ATGCTATACTCCCTAATGCGGGAGTCTAGAGTAGTCATCGAGTACGATGGCAGGGCGTATGGATTTGACGCCCTGTCTGATTACACTGCTGGAACGTCCTACGAAGAGTTTAAAGCAAATCGTAGGACGATTCACAGACGCAGTAACTACGCCTATTCGAAGATAACTGCTCAGTCTCCTTCTTCAATTTCTCTAACTCTTAATTTCTCTAGCAATGCTCTCGAAGGTCTATTTTTCGAGTTGATGGGGTTTATAGAGGTAGACGGAATGTATCAGATGCCCTTGTTCAGTAATAATATTGAGCCCAAAATGTTCTCTGTATATATTATTAACAAGAACACGAGCTTACGTTTCGATAACTGTTTTGCTACCACCTGTGACTTTTCTCTGGATAAGAGTGTCCCGGTGCTAAACGTTGGTATCGAGTCGGGATACTTTGAGGAAGTAGGCCACCCACTCAATAGCTATACGCTTGATCAAGGTGAGGTGCTACCATTTTCATTACCTCAGGTATCTTCGAAGGGGAGAGTGCTCCCAGGACTTATGTCAGCCGGTATGTCATTCCAGCAGCAATGCGAGTGGCGGGGCGACAGAAGTTTATTCGATATCAATAAGATTTATAATAATAGGAGGGCAATCGTTAACGAATTGAACTCATCCGCTTTGATATCGATGTACTATGCGAAGAGTCTTCAGATAGATTCCACGCATAACATTAAACCTGATATGGGCCTACCGGTACAAATCAGAAATAAATATATTGTGGTGGACTTTCCATCCACTAAAATCACAAAACGCCTAGACTTAACCGACGTGTACAAGATCGATTACGATGTAGTCCCTACGGAGCAATCAGATCCTGTCCGAATAAAGCTAATTGGAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0398703a50cd6592496293e9eaee969e8c4b7fa58764323654331d64ce1ced5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella pneumoniae bacteriophage Sugarland Erickson,S.G., Lessor,L., O'Leary,C.J., Gill,J.J. and Liu,M. 2018-11-15 — GenBank