Protein

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Genbank accession
UMO77109.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLADLQTAKKHQIFEAEVITGKSGGVAGGADIDYATNPNTGQVQKTMPAILRDIGFEPASFDFTSGGTLTPNDRNKAVLWPMADGGDGDWYYWEGTLPKVIPAASSPLTAGGIAEGAWRPVGDITLREELLESVLVMNGARFALRDIHSALDFAGVVADGVTDVTTALQAGIDSLPAGSALLFTGGTFLFDKVTISKPLTVTGDAEMVHNGFRIKTSNFTSTLLGKQQSRTYGSQSRCFEIRAYEDAADYENIKILFNDMAGFFYSTDFRGREYSAAPNDPANRVVKNTLIMGCTSTAPAGQAAGNYQHIGITNAKCIGNSAYNGVNASSYNFINGNGYLIVTGNYDDNNTYGSLEIENNLVSHATISGNTFKKQLWVDDTSNVSIVGNTVSDRIFLTAQSNDTDNITVSGNTCTRLSATTFGPIEEQIGRHKGIHVIGNTFYGEAGVNDIFADGHVDCITIESNALNGVDSNAIALVRSPTCNHMVRNNRSKVTRALAISGSGGRVVEYGNDNITLSGTSESHHISNLMQPSLDFLDLPGRYLHSTKYTGSIAPLGSASLSLPIPDSAGLAFRGVSLWVMIRDAVTNNISIYRIDGVYKAVGASIQLSFSTPYSAFGVDTASINVANNASTSNSINILVSNTHVTKILQVTVMPEVTSKLGTEE
Physico‐chemical
properties
protein length:674 AA
molecular weight: 71611,04140 Da
isoelectric point:5,12815
aromaticity:0,07864
hydropathy:-0,09792

Domains

Domains [InterPro]
DC_0018
ATT
1–260
DC_0018 DC_0828
G3DSA:2.10.10.80
ATT
66–141
G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
94–132
IPR040775 IPR011050
UMO77109.1
1 674
Architecture
ATT
STR
RBD
ATT 1-260 | STR 261-481 | RBD 482-674
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UMO77109.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9920
Central domain 174 526 354 0,9895
C-terminal 527 674 147 0,9406
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-526
C-terminal
527-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage fBC-Eco01
[NCBI] 		2914167 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO77109.1 [NCBI]
Genbank nucleotide accession
OM272052 [NCBI]
CDS location
range 23235 -> 25259
strand +
CDS
ATGTCAAGCGGATGCGGTGACGTTTTAAGCCTGGCGGATTTACAAACCGCCAAAAAACACCAGATTTTCGAGGCTGAGGTTATCACCGGTAAATCTGGTGGCGTTGCAGGTGGTGCAGATATCGACTATGCCACTAACCCGAACACCGGCCAAGTTCAAAAAACTATGCCAGCCATTCTGCGCGATATTGGGTTCGAACCAGCGTCTTTTGATTTTACATCTGGCGGTACTCTTACCCCGAACGACCGTAACAAGGCGGTTTTATGGCCTATGGCGGATGGTGGTGATGGCGACTGGTATTACTGGGAGGGCACGCTGCCGAAGGTCATACCAGCCGCGTCTTCACCGTTAACGGCTGGAGGTATTGCCGAGGGGGCATGGCGGCCTGTGGGGGATATCACGCTGCGCGAAGAGCTTCTTGAGTCTGTTTTGGTTATGAATGGTGCTCGATTTGCCCTTCGAGACATTCATTCTGCGCTTGATTTTGCGGGTGTAGTTGCTGATGGCGTGACTGATGTGACTACCGCACTGCAAGCGGGCATCGATTCCCTGCCCGCCGGTAGCGCTCTGCTGTTTACAGGCGGGACATTCCTGTTCGATAAGGTCACGATTAGCAAGCCACTCACTGTAACCGGCGACGCAGAGATGGTTCACAATGGGTTTCGAATTAAAACCAGTAACTTCACATCCACCCTGCTTGGCAAGCAGCAAAGTCGAACCTACGGCAGCCAATCACGTTGTTTTGAAATACGTGCGTATGAAGATGCTGCTGATTACGAAAACATCAAGATCCTGTTCAACGACATGGCGGGGTTCTTCTATTCGACTGATTTTCGCGGTCGTGAATATTCAGCCGCACCAAACGACCCCGCCAACAGAGTGGTAAAAAATACGCTGATTATGGGTTGCACCTCAACGGCCCCCGCCGGTCAGGCTGCTGGTAACTACCAGCACATAGGCATAACTAACGCCAAGTGCATAGGTAACTCAGCCTATAACGGAGTAAACGCCTCAAGCTACAACTTTATAAACGGCAACGGGTATCTGATAGTTACCGGGAATTATGACGACAACAACACCTACGGTTCGCTTGAGATAGAAAACAACCTAGTTTCTCATGCGACGATCTCAGGCAACACATTCAAAAAGCAGTTGTGGGTAGACGATACAAGCAACGTCTCCATCGTCGGAAATACCGTGTCAGACAGGATTTTCCTTACTGCGCAGAGTAATGATACCGATAACATTACTGTGTCGGGGAATACCTGCACGAGGCTGTCAGCCACCACATTTGGACCGATTGAGGAGCAAATAGGGAGGCATAAAGGGATTCATGTCATTGGTAATACGTTCTATGGTGAGGCGGGGGTTAATGATATCTTTGCCGATGGTCACGTTGATTGCATCACTATTGAATCCAATGCATTGAATGGGGTCGATAGTAACGCCATCGCATTGGTGCGCAGCCCAACATGTAACCACATGGTGCGTAATAACCGCAGTAAAGTGACTCGCGCCTTGGCAATCTCCGGGTCTGGTGGCCGGGTTGTTGAGTATGGCAACGACAATATAACCCTTTCTGGTACGTCCGAAAGTCATCACATCTCAAACCTCATGCAGCCAAGTTTAGATTTTCTTGACCTGCCTGGGCGTTACCTGCACAGCACTAAGTACACGGGGTCTATCGCGCCGCTCGGCTCTGCCTCCCTATCCCTGCCAATCCCAGATAGTGCTGGGCTGGCATTCAGGGGGGTGTCACTGTGGGTGATGATAAGGGATGCCGTGACCAATAATATATCTATCTACAGAATTGATGGTGTATACAAAGCCGTTGGGGCTTCGATACAGCTGTCTTTTAGTACGCCCTATTCGGCATTTGGTGTCGACACTGCATCGATTAATGTTGCTAATAACGCTAGCACATCGAATAGCATCAATATCCTTGTGTCTAACACTCATGTGACGAAAATATTACAGGTTACTGTTATGCCTGAAGTGACAAGCAAACTTGGGACTGAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8fd6794334edccf3321b0e2cfee83456c13cdf451f57caa0ad84efd8ca3b62e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8062
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and genome Characterization of a new bacteriophage of E. coli strain isolated from peritoneal puncture fluid Grami,E., Badawy,S., Kiljunen,S., Neila,S. and Skurnik,M. 2023-01-07 — GenBank