Protein

View in Explore
Genbank accession
AIX17686.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MSQLKVNSIKGINVPASGPQIDIGNTGDINLNNSNVTGVTTATATTANITTNNVTTENVTTLNVTNTLDLRNADQLIVPSGTNAERPATPNVGTIRYNTETGKPEFWNGSTWKNFTIQRFSEEISSGSSWSVPAGVTSVDVLVVAGGGDGGSGTGGGGGAGGVVYATGFGVTPGGSVPISIGAGAAGGGQGRGRNGSNSTFGTITANGGGGGGSTYPPQRAAGRPGGSGGGGAQHPAGRSGNGSATQPASPSGGGVGYGNAGAPGGEGGGGGAGGRGSGNQGGVGVTITVGETDYSVGGGGRGQSRSPQSGNGAGVPFGGGGTNGTVGRTGIDGTGGGGGAGWGFSGGRRGAGGDGRIYISYLN
Physico‐chemical
properties
protein length:364 AA
molecular weight: 34379,42350 Da
isoelectric point:9,33884
aromaticity:0,04945
hydropathy:-0,37005

Domains

Domains [InterPro]
DC_0654
STR
2–297
DC_0654
IPR049304
STR
127–362
IPR049304
AIX17686.1
1 364
Architecture
STR
STR 2-362 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014b
[NCBI] 		1493508 Uroviricota > Caudoviricetes > Pantevenvirales > Nereusvirus > Nereusvirus tusconc4
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIX17686.1 [NCBI]
Genbank nucleotide accession
KJ019042 [NCBI]
CDS location
range 29746 -> 30840
strand +
CDS
ATGTCACAACTTAAAGTTAATTCTATTAAGGGCATCAATGTTCCTGCATCGGGACCGCAAATTGATATTGGTAACACAGGAGATATTAATCTTAATAACTCTAATGTTACTGGTGTTACTACGGCAACCGCAACGACTGCGAACATTACTACCAATAATGTAACTACAGAAAATGTAACAACTTTGAATGTTACTAATACTCTGGACTTGCGTAATGCAGACCAGTTAATTGTTCCTTCAGGAACAAATGCTGAGAGACCTGCAACACCAAATGTTGGTACGATCCGATATAATACTGAAACTGGTAAACCAGAATTCTGGAATGGATCTACATGGAAAAATTTCACTATTCAAAGATTCAGTGAAGAAATTAGCTCAGGTTCTTCTTGGAGTGTTCCTGCTGGTGTAACTTCTGTCGATGTTTTAGTAGTTGCTGGCGGCGGTGATGGCGGTTCAGGCACTGGCGGTGGTGGTGGTGCTGGTGGAGTTGTTTATGCTACTGGATTTGGTGTAACTCCTGGTGGGAGTGTTCCAATTTCTATTGGTGCAGGTGCTGCTGGTGGTGGTCAAGGTAGAGGTCGTAACGGTTCTAACAGCACCTTTGGCACCATCACTGCTAACGGTGGTGGTGGCGGTGGGTCTACTTACCCTCCTCAGCGTGCTGCTGGTCGCCCTGGCGGTTCAGGCGGTGGCGGTGCTCAACACCCAGCAGGTAGAAGTGGCAACGGTAGCGCAACTCAACCTGCATCTCCTTCAGGCGGTGGCGTTGGTTATGGCAATGCAGGTGCTCCAGGTGGCGAAGGCGGCGGTGGCGGCGCTGGTGGTAGAGGTTCAGGCAATCAGGGCGGTGTTGGTGTTACCATCACTGTTGGTGAAACTGACTATTCAGTAGGCGGCGGCGGTAGAGGTCAATCTCGTTCTCCTCAATCTGGAAATGGTGCTGGTGTTCCCTTTGGTGGCGGCGGTACTAACGGCACTGTTGGTCGTACTGGTATCGATGGCACTGGTGGCGGCGGTGGTGCTGGATGGGGGTTCAGTGGTGGACGCCGTGGCGCTGGTGGCGATGGTCGTATTTACATTTCATATCTGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1935a7fc7d6605631ef67ecc3df864215b59b1998f62f7471721e18b18f4263
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank