Protein

View in Explore
Genbank accession
WBK39834.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNIPYHSIKKQPGGVSTNQGTWTYSNVGLVDDVLQAADIVYAGAYDSILTYDFTNTIGEISSANMVMGIELVASIQTTGDSGMQFVVERKNTPGKKLCEFPRYSDSELYTSIGGIAEKRLFLANKPFERVFGPDTAWDNPTSLDEYSFGFKVVGTSGTLNVSEFYIRVYYREAITFDEISTASRSAAFQFVEIEGIRYIPTDLKIAPEGRRDVQDYYFGWERFALPGTMKTIGDIRSGKVDFSTGIVEYPSASISLIDVNKVSFEDGHRIIKKNGFYSWLTCYADRTSFYYGILTDGTGAGYNTIKGLNPQNAAQELGQICHVEDVTDAPTANTIDSYLYIGKEAIWYGTSNATNDTFGVGDNDTYIARGQFSSDNYPHVYNRTTGVYPEISSHPLSWTGRLVRIWTVPFDPVTGFPMPISYGTARSFVWASHENIVGPGENQINVSLAPLNTVLDKKLVDVESAPLEKLSFGSGNKQIRIFEGNDAVLLERNSTFWALNLDETYNSVFDLVEDINSDLLPNAVKIWGVATGFLASWQANVINGKLSLKAYGPVNWIGNDVSNVGVYQSGDMQHYTGWDAEPTMESYDSSDMVVRKTQKKGYVTYLNATAEKIYANSDIINSWGLTDYGVNSPHYIDPAGGSCVQMIRVGDEEYFAPKSNATSDSYGSYVSVYSGEFWPVESEKGREPVGQEVGKKPVSVSPVMVWTGSDVSKILIAHLVSKGFGTDTTGYDFLPFGASLMLNSSFINYTQMEMECDYLRGFGARTFVADDKTTYKELLDQELKLPVPIVLGQDRYGRYTLISEQSQVNSRDNNLPSISDSHVLRNKRLSVGYSRENIVNKIVLKCDYSVAEEKFMTTLVAVESNSMQTYGERQIEISSKLIRSDRIGGTGSVISNNENVFSAFVGMASWLFRCRAWEVPTISFSTNARGLSLHSGQPISLTLENIQDITNSNATGIDGRKCQIVKIDKDSITGECKIQVVFDRFKTRSAGWSPSLIVSSVSGAVITVETDKFSYSDPPYSNLENSDLLYFSSGDAVTIMDYNSETPNYDYRTIASIDLSSSEITLNSAPSNTYAAGDVIIFSDYDKLTPAQKAHNYATMADPTGFINGSQDVEGFSYRA
Physico‐chemical
properties
protein length:1121 AA
molecular weight: 123859,65420 Da
isoelectric point:4,79416
aromaticity:0,11418
hydropathy:-0,26842

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacteraceae phage LS06-2018-MD06
[NCBI] 		3003839 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBK39834.1 [NCBI]
Genbank nucleotide accession
OP947162.1 [NCBI]
CDS location
range 17188 -> 20553
strand -
CDS
TTGAGTAATATACCGTACCACAGCATAAAAAAGCAGCCTGGTGGTGTAAGCACAAATCAGGGAACGTGGACTTACTCAAACGTAGGACTAGTAGATGACGTGCTGCAAGCTGCAGATATTGTATATGCCGGTGCTTATGATTCCATTCTTACCTACGACTTCACAAACACCATAGGCGAAATATCAAGCGCAAATATGGTAATGGGAATAGAGCTTGTTGCCAGCATTCAAACCACTGGCGATTCCGGTATGCAGTTTGTGGTAGAAAGGAAGAACACTCCAGGAAAGAAGCTTTGCGAATTTCCAAGATACTCAGACAGTGAGCTTTACACCAGCATTGGAGGCATAGCAGAGAAGAGGCTATTCTTAGCCAATAAGCCATTTGAAAGAGTTTTTGGCCCAGATACGGCATGGGATAACCCAACATCTCTAGATGAATATTCGTTTGGGTTTAAAGTGGTTGGCACGTCTGGTACGCTGAACGTCTCAGAGTTTTACATAAGAGTCTATTATCGAGAGGCGATTACCTTCGATGAGATATCCACGGCAAGCCGCTCAGCAGCCTTCCAGTTCGTCGAAATCGAGGGCATACGGTACATCCCGACTGACCTGAAAATCGCTCCAGAGGGCCGCAGAGACGTTCAGGACTACTATTTCGGCTGGGAGAGGTTTGCGCTTCCGGGCACCATGAAAACCATCGGCGACATAAGGTCTGGCAAGGTAGATTTCAGTACAGGAATTGTTGAGTACCCAAGCGCTAGCATATCTCTCATAGACGTAAATAAGGTAAGCTTTGAAGATGGTCACCGCATTATAAAGAAGAACGGATTTTATTCTTGGTTGACTTGCTATGCAGACAGGACCAGTTTCTACTACGGAATATTGACCGACGGCACCGGTGCAGGCTACAATACAATCAAGGGGTTAAATCCTCAAAATGCCGCTCAAGAGCTTGGCCAAATCTGCCACGTAGAGGATGTAACAGATGCGCCGACTGCTAACACGATTGATAGCTATTTATATATCGGAAAAGAAGCAATTTGGTACGGGACGTCTAACGCCACTAATGATACCTTTGGCGTCGGTGATAATGATACTTACATTGCTCGTGGGCAATTCAGCTCGGACAACTATCCTCACGTATATAATCGCACTACTGGAGTCTATCCAGAAATATCTAGTCATCCTTTGTCATGGACAGGTAGGCTTGTTAGAATATGGACCGTTCCTTTTGACCCTGTTACTGGTTTTCCTATGCCCATTTCTTATGGTACCGCTCGCAGTTTTGTATGGGCTTCCCATGAGAATATTGTAGGCCCCGGCGAGAATCAGATTAACGTTTCACTTGCACCGCTAAATACAGTACTCGATAAGAAACTGGTTGACGTAGAATCAGCACCACTCGAAAAGCTCTCATTTGGAAGCGGTAATAAGCAGATAAGAATATTTGAGGGAAATGATGCGGTACTGTTAGAAAGAAACTCAACATTCTGGGCGCTAAATCTCGATGAAACTTATAACTCAGTCTTTGACCTTGTTGAAGATATAAACTCAGACCTGCTACCGAACGCAGTAAAAATCTGGGGAGTTGCCACCGGATTCCTTGCATCTTGGCAGGCAAATGTTATCAACGGCAAGCTCAGCCTAAAAGCGTATGGACCAGTTAACTGGATTGGCAATGACGTTTCAAACGTTGGTGTTTATCAGTCTGGTGATATGCAGCACTATACAGGGTGGGACGCTGAACCAACAATGGAATCGTATGACAGTAGCGATATGGTCGTAAGAAAGACTCAGAAAAAAGGCTATGTAACGTACCTCAATGCGACCGCAGAAAAGATTTATGCAAACTCTGACATTATAAACAGCTGGGGCCTGACAGACTATGGCGTCAACTCTCCACACTACATAGACCCCGCCGGTGGAAGCTGCGTTCAAATGATAAGGGTTGGAGACGAAGAGTACTTTGCGCCAAAGTCAAACGCCACCTCTGATAGTTACGGCAGCTATGTCTCTGTGTATAGTGGAGAGTTTTGGCCAGTAGAGTCAGAGAAGGGCAGAGAGCCTGTTGGCCAAGAGGTTGGTAAGAAGCCTGTCAGTGTTTCACCCGTTATGGTCTGGACAGGCTCTGATGTATCCAAAATTCTGATTGCGCATCTTGTATCGAAGGGGTTTGGCACTGACACTACCGGTTATGACTTCCTGCCGTTTGGCGCTTCTCTGATGTTGAACAGTTCGTTCATTAATTACACTCAGATGGAAATGGAATGCGACTATCTCAGGGGCTTTGGTGCAAGAACATTCGTTGCAGATGACAAGACAACATACAAAGAGCTATTAGACCAAGAGCTTAAACTGCCAGTCCCAATCGTGCTTGGACAGGATAGATACGGAAGATATACTCTCATATCAGAGCAGTCACAGGTCAACTCGCGCGACAATAATCTTCCATCTATATCTGATAGCCACGTTCTTAGAAATAAAAGACTATCTGTTGGATATAGCAGAGAGAATATCGTAAATAAAATCGTGCTAAAGTGCGATTACTCTGTTGCCGAGGAAAAGTTTATGACAACTCTCGTTGCTGTAGAATCTAACAGTATGCAGACTTATGGTGAACGACAGATAGAGATTTCGAGCAAGCTGATTAGAAGTGATAGAATCGGCGGAACTGGCTCTGTTATATCTAACAATGAAAACGTGTTTTCCGCGTTTGTTGGAATGGCCAGCTGGCTTTTTAGGTGCAGAGCTTGGGAAGTTCCCACCATTTCTTTCTCGACGAACGCCAGAGGGTTGAGCCTGCACTCAGGACAGCCGATATCTCTTACGCTTGAAAACATTCAGGATATAACGAATTCTAATGCAACCGGAATCGACGGCAGGAAATGTCAAATTGTTAAGATTGACAAGGATTCGATAACCGGCGAATGTAAAATCCAGGTAGTATTTGATAGGTTTAAAACTCGCTCTGCTGGATGGTCTCCATCTTTGATAGTATCCTCGGTTAGCGGAGCAGTGATAACTGTCGAAACTGATAAATTCTCATACAGTGACCCGCCGTACAGCAACCTTGAAAACTCTGACCTTTTATACTTCTCATCCGGCGATGCTGTTACGATTATGGACTACAATAGCGAGACGCCAAACTATGACTACAGAACTATCGCATCAATAGATTTGTCAAGCTCTGAGATAACCCTCAACTCTGCTCCTTCTAATACGTACGCTGCCGGAGACGTGATAATCTTTTCTGACTATGACAAGCTAACACCTGCCCAAAAAGCACATAACTATGCAACAATGGCAGACCCGACTGGCTTTATTAACGGCAGTCAAGACGTAGAGGGATTTTCATACAGGGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
87a68bca48377e3dc4e5ea8f911d865817c5839b58ef793062e772d4c6266784
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4745
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Horizontal gene transfer and CRISPR targeting drive phage-bacterial host interactions and co-evolution in pink berry marine microbial aggregates Kosmopolous,J.C., Campbell,D.E., Whitaker,R.J. and Wilbanks,E.G. — — GenBank