Protein

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Genbank accession
WIS40081.1 [GenBank]
Protein name
tail tube
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MILEGVYPSFLKGVSQQTPQERSDGQLGAQLNLLSDAVTGLRRRGGVKFQAKLTGIPNSSYIRLIDINGVNYIMIVDTVTGTLKIYNFDGSLLKAHQTDYLKASNGKASIRSTVSRNNCFVLNTEQVITKTPTGGTNPIPNPSTMGYISIRSGQFSKMYSVDIKSGSYTLSFGVGTSGSEAWQATPEWVATEMENRIKEDTTLNARYTVVREGNTVALKAKSAIDTNLLVIESGTGSTYIQTSNSSRVQGKQDIIANLPNILDKYIIAVGTVGNSAYYQYNATTSTWKECGVYEAPYKFTNEPIYWYFDDTDTIQVKSLDIQPRTAGDDDNNPLPKFVDFGITGISAYQSRLVLLSGSYVNMSATADFNVYMRTTVEELQDDDPIEVSSTALSAAQFEYAVPYNKDLVLLAQNQQAVIPANSTVLTPKTAVIYPSSKANISMASEPQVVSRSLYYTYQRGTDYYQVGEMIPNAYSDAQYYAQNLADHIPLYATGVCTSITGSTTDNMAVFSSDQKELLVHQYLWAGEDRPLMSFHKWELPYDVLNVQFLQEYLVLFMDVGDDLVVGTINVQLNQLDNKPIPFLDIYQYVDIVDGEGTLPEFLPEGELVAAVYSSETMRHAMVQYEIEGTKIKCQFNGRIYLGVPYESSLTLTPPFVKDDKGRVVAGSNSTVVDLTMTFKSTGEFEYHVSDTYGDVFDGETSAQAWSEAQLGYTRVNTVSDVKFPCGTLLNSTEFSIRTTGTTELNIISASYNIRVPNRGRRHL
Physico‐chemical
properties
protein length:763 AA
molecular weight: 84404,66530 Da
isoelectric point:4,82588
aromaticity:0,10223
hydropathy:-0,23761

Domains

Domains [InterPro]
DC_0058
STR
1–763
DC_0058
IPR058003
TTP
7–761
IPR058003
WIS40081.1
1 763
Architecture
STR
STR 1-763
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIS40081.1
1 763
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9845
Central domain 138 339 203 0,1344
C-terminal 340 763 423 0,1878
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-339
C-terminal
340-763

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaAut_ChT04
[NCBI] 		3041534 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIS40081.1 [NCBI]
Genbank nucleotide accession
OQ858591 [NCBI]
CDS location
range 3563 -> 5854
strand -
CDS
ATGATTCTTGAGGGAGTGTACCCGTCATTCTTGAAAGGTGTATCACAGCAAACACCTCAAGAGCGTAGTGACGGACAATTAGGCGCACAGCTTAATTTATTATCTGATGCTGTAACAGGTTTACGTAGACGTGGTGGGGTTAAATTCCAAGCTAAGTTGACAGGTATTCCGAATAGCAGTTATATACGTTTAATTGACATCAACGGTGTTAATTATATTATGATCGTAGATACTGTTACAGGTACTTTAAAGATTTATAATTTTGATGGTTCCTTACTTAAAGCACATCAAACAGATTATCTTAAAGCCTCCAACGGTAAGGCTAGTATCCGTAGTACAGTCTCACGTAATAATTGCTTTGTATTAAATACAGAACAAGTTATTACTAAGACACCTACAGGCGGTACTAACCCTATACCTAATCCAAGTACAATGGGTTATATCAGTATTCGTTCTGGTCAGTTCTCTAAGATGTATTCAGTAGACATCAAGTCAGGTTCTTATACCTTAAGTTTTGGTGTGGGTACATCGGGTAGTGAGGCATGGCAGGCTACTCCTGAATGGGTAGCTACTGAGATGGAGAATAGGATTAAAGAGGATACTACTCTTAATGCGCGTTATACTGTTGTACGGGAAGGTAATACGGTTGCACTTAAAGCTAAATCTGCTATAGATACAAACTTGCTAGTGATTGAGTCTGGTACAGGTAGTACTTATATTCAGACGAGTAATTCTAGTCGTGTACAAGGTAAACAGGATATTATTGCTAATCTACCTAATATCTTAGATAAGTATATTATTGCGGTAGGTACAGTAGGTAACTCCGCTTATTACCAATACAACGCTACTACAAGTACTTGGAAAGAATGTGGTGTATATGAGGCTCCGTATAAGTTCACTAACGAACCTATTTACTGGTACTTTGATGATACTGATACTATCCAAGTTAAAAGCCTAGATATTCAACCCCGTACAGCAGGTGATGATGATAATAACCCACTACCTAAGTTTGTGGATTTTGGTATCACAGGTATTAGTGCTTATCAATCACGTTTAGTACTACTTAGTGGTTCATATGTTAATATGAGTGCTACAGCAGACTTTAATGTCTATATGCGTACTACTGTAGAGGAATTACAGGATGATGACCCTATTGAAGTGTCTAGTACTGCTTTGAGTGCTGCACAGTTTGAATATGCTGTTCCGTACAATAAAGATTTAGTTTTATTGGCGCAGAATCAACAAGCTGTTATCCCAGCTAACAGTACAGTACTTACACCTAAGACGGCTGTTATCTATCCAAGTTCAAAAGCTAACATTAGTATGGCTAGTGAACCGCAGGTCGTATCACGTAGTTTGTATTATACATATCAACGTGGTACAGATTACTATCAAGTTGGTGAGATGATCCCTAATGCTTACTCAGATGCACAGTACTATGCACAGAACTTAGCAGACCATATCCCGTTATATGCTACAGGTGTTTGTACTTCAATCACAGGTAGTACTACTGATAATATGGCAGTGTTCAGTTCAGACCAGAAAGAGTTACTTGTACACCAGTACTTATGGGCAGGTGAAGATCGTCCGTTAATGAGCTTCCACAAATGGGAGTTACCTTATGATGTACTTAACGTACAATTTCTACAAGAGTATTTAGTCCTGTTTATGGATGTTGGTGATGATTTAGTGGTTGGTACTATTAACGTACAGTTAAACCAACTAGACAATAAACCTATCCCATTCTTAGACATTTACCAATACGTAGATATTGTGGATGGTGAAGGTACATTACCTGAGTTCCTACCAGAGGGTGAGTTAGTAGCTGCGGTATACAGTTCTGAGACCATGCGTCACGCTATGGTTCAATACGAAATCGAAGGTACTAAGATTAAATGTCAATTTAACGGGCGTATTTATCTAGGTGTACCTTATGAAAGTTCACTCACACTAACACCCCCATTTGTTAAAGATGATAAAGGTCGTGTAGTTGCTGGAAGTAATAGTACAGTGGTTGATCTTACAATGACATTCAAAAGTACAGGTGAGTTTGAGTACCATGTTTCTGATACCTACGGTGATGTATTTGATGGGGAAACATCCGCACAAGCTTGGTCAGAAGCACAACTAGGGTATACGCGAGTAAATACAGTTAGTGATGTTAAGTTCCCTTGTGGTACATTATTAAATTCAACAGAGTTTAGTATTAGGACTACAGGTACAACGGAGTTGAATATCATTAGTGCTAGTTATAATATCCGTGTACCGAACAGAGGACGGAGACATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6096e32e85741eb7421b58af039bad5f67a4ab671e0314b75df5a36b4e3f35b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome characterization of the novel lytic phage vB_AbaAut_ChT04 and the antimicrobial activity of its lysin peptide against Acinetobacter baumannii isolates from different time periods Leungtongkam,U., Kitti,T., Khongfak,S., Thummeepak,R., Tasanapak,K., Wongwigkarn,J., Khanthawong,S., Belkhiri,A., Ribeiro,H.G., Turner,J.S., Malik,D.J. and Sitthisak,S. 2023 37660314 GenBank