Protein

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Genbank accession
URQ09119.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,59
Protein sequence
MAIQSFLNFLDESKQLDEAFNSAPYELTFGKKNAGDIFFTFIDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGTTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPVQNNTPDVGTGSSTEIEVNRQWYNSSDTSLELKNGRDPIRGNYVQLVSGSREVAKFFGYDFDKYPDGTEVAWSMKRGFTNQDLVGAVMTKQNKGIYDQYVFKKGGQVVLTIDVDADNKSTVDSNTTVGATSIQQLIDNGFVARVLGIIDTNIDQRASYLPGDSIKKIGQARYQTKGGLVIIVSFDSVDSKNLKYSVFSEIETQPGVISGDARRVANEIMETITYVAEHQYRGEWEINAVPMSAPYPIKAIRHSQGWGYVETANWTLKVSDALLNRVKPGKTALLELNKEPLRGKHLLEIIPEKGDKTLMLKDRSGAIYGSIDLNAQGADLVNSGTLKIPRNAMVFGETVNGMSITWSGINFPKGGKYDGAVMTTNVTYYYDKGKVAITPMVSNKGRTLNNPKTYELPLTKEFVQETLDSWSETMQMVARNMQTLTSENYNPMQVFLDDIHVGDKGEVLWRGHNMGDRRATEIMLNILGKETDRLEKEQPGTAKKTGVDLATYAGSIRDNAPKGRDLDWQIYASRDGQTLNVDWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTEPNLMTLARAQQSDEWAASNGESAYSEYEQSLGGNLQIKI
Physico‐chemical
properties
protein length:805 AA
molecular weight: 90044,55500 Da
isoelectric point:6,63268
aromaticity:0,09317
hydropathy:-0,52919

Domains

Domains [InterPro]
DC_0099
STR
1–805
DC_0099
URQ09119.1
1 805
Architecture
STR
STR 1-805
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ09119.1
1 805
Domain Start End Length (AA) Confidence
N-terminal 1 468 468 0,7914
Central domain 469 769 302 0,6316
C-terminal 770 805 35 0,1125
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-468
Central
469-769
C-terminal
770-805

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BRM 13314
[NCBI] 		2654656 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ09119.1 [NCBI]
Genbank nucleotide accession
ON169963 [NCBI]
CDS location
range 148307 -> 150724
strand +
CDS
ATGGCCATCCAATCTTTCTTAAATTTCCTTGACGAGTCCAAACAATTGGACGAAGCGTTTAACTCCGCTCCATACGAATTGACTTTCGGCAAGAAAAATGCTGGTGACATTTTCTTCACGTTCATAGACGAAGATGAAAAAGAATTCCGCATCCAATTTTATACCCCGCAGGGGCTGGGCAAGAACGTTCGTCAGGTCTTCATAGGCCAGAAACGTGGTTCAACCTATCCAGACGCAATCGGTCGTTTCAAAAACCCAATGCGTGTCATCGCATCCATGATCGAAGCGACTAAACAATTCATGGCGACACCGCTGGGTAAAACCATTGATGGGTTTGCGATTAACTTCTCCAAGAAAGCTCTAGAACGCGGAACGACGTTACTCCCAAAAATTATTCGTCAATCTGGTCTGAAGCAGAAACTCAACGTCATGGATCTGACTTATACCCCAATCCCTGACCGTGCCTTCGTATGGGTTGTGCGTAAAGGAAAGGATCCTGCTCAGGTATTTGATGGTCCGAAAATGAAAGGCGTGACTTGGGACGATCCAGACAAAGTCGGAGACGTTCCGGTTCAGAACAACACCCCTGATGTTGGGACTGGCTCCAGCACCGAGATTGAAGTAAACCGCCAATGGTATAACAGTTCTGACACTAGTCTTGAACTGAAAAATGGCCGTGACCCAATTCGCGGAAATTACGTGCAGCTGGTCAGTGGCTCACGTGAAGTGGCGAAGTTCTTTGGGTATGATTTCGACAAATATCCGGACGGCACCGAAGTGGCATGGAGCATGAAGCGGGGATTCACTAACCAGGATCTAGTTGGCGCTGTCATGACAAAACAAAATAAAGGCATCTATGATCAGTATGTGTTCAAGAAAGGTGGTCAAGTAGTTTTGACTATTGATGTTGACGCGGACAACAAAAGCACGGTCGACTCCAACACAACCGTGGGTGCGACCAGTATCCAGCAACTGATTGACAACGGGTTCGTTGCTCGGGTTCTAGGCATAATCGACACCAACATTGATCAGCGAGCAAGCTATCTCCCAGGAGACAGCATTAAGAAAATCGGTCAGGCGCGTTATCAAACTAAAGGCGGTTTGGTGATCATTGTTAGCTTCGATTCAGTCGACAGCAAGAATCTAAAATACAGTGTGTTCTCTGAAATCGAAACCCAGCCTGGTGTAATTTCCGGTGATGCTCGTCGCGTGGCCAACGAAATTATGGAGACCATCACCTACGTTGCCGAACATCAGTATCGCGGCGAATGGGAAATCAATGCGGTGCCGATGAGCGCCCCATATCCTATCAAGGCCATCCGTCATTCTCAGGGTTGGGGTTATGTTGAAACAGCCAACTGGACTCTGAAAGTGTCCGACGCTCTCCTGAACCGCGTGAAACCAGGAAAGACAGCTCTGTTGGAACTTAACAAAGAACCTCTGCGCGGTAAGCATCTCCTGGAAATCATCCCAGAGAAAGGCGACAAGACTCTGATGCTGAAAGACCGTAGCGGGGCGATCTATGGTTCTATCGACCTGAATGCTCAGGGCGCTGATCTGGTCAACTCTGGAACACTGAAGATACCGCGCAACGCCATGGTGTTTGGTGAGACAGTCAATGGCATGTCCATCACGTGGTCTGGTATCAATTTCCCGAAAGGCGGAAAGTATGACGGCGCTGTGATGACGACTAACGTGACATATTATTACGACAAAGGCAAAGTGGCGATCACGCCTATGGTCTCTAACAAAGGCCGTACCCTGAACAATCCGAAGACGTACGAACTCCCGTTGACTAAGGAATTTGTTCAGGAGACCCTCGACAGTTGGTCGGAGACGATGCAAATGGTTGCCCGTAACATGCAGACCCTTACGAGCGAGAACTACAACCCGATGCAAGTCTTCCTCGATGATATCCACGTGGGTGACAAGGGTGAAGTTCTATGGCGTGGACACAACATGGGTGACCGTCGTGCAACAGAGATCATGCTGAACATCCTTGGCAAAGAAACGGATCGCCTTGAGAAAGAGCAGCCTGGCACTGCGAAGAAAACTGGCGTTGACCTTGCAACATACGCTGGTTCCATCCGAGATAACGCCCCGAAAGGCCGCGACCTGGATTGGCAAATATATGCCAGCCGCGACGGTCAGACCCTGAACGTGGATTGGGACATCACCTTCCGTCGCAACACAACTGAAGGTGCATATCGTGAGTTCAAAGATCAGATCAACCGTGCTAACCAGTACTTACAAACGGTATACAACGATGCGAAATCGAAGGGATATAACCCGACAGAGCCAAACCTGATGACTCTGGCTCGTGCCCAGCAGTCCGACGAATGGGCGGCAAGCAACGGGGAAAGCGCATACAGTGAGTATGAGCAGTCTCTGGGCGGCAATCTTCAGATTAAGATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c8e6c576657fec3c1b16f63c290105549ccf4a6767b84559a7663240744b157
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, comparative genomic analysis and efficiency of wild-type bacteriophages on the reduction of Salmonella Heidelberg colonization in broiler chickens Vaz,C.S.L., da Fonseca,F.N., Voss-Rech,D., Mores,M.A.Z., Coldebella,A. and Cantao,M.E. 2024-05 — GenBank