Protein

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Genbank accession
QGZ17689.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MTSTIKVDNIQDQDGNNIINENANTITIGASGDTVTLASGASQSGFGRTGTVDWDTTPKTASFTAVSGNGYFVNTTSSAITVTLPASPSAGNIVAVMDYANTAATNNITVARNSSKIDGEDIDATMKTNGQSFTLVYVDSTEGWKTVNNANEQINTTSFVAATGGTISTCGNFKVHTFTGPGCFTVTCAGNSGGSNTVDYFVVAGGGGGGAGCGGGGGAGGFRVSNSVGCIPAPTMSPLANPTGLPVSAQVYPITVGGGGVGRQFPPGGDGGNGSNSVFSTITSAGGGGGGGPGQPGVNGGSGGGRGPGTPVGSGNTPPVSPPQGFPGRPGPNGSGGGGAGGADPQPPGGGGVDGSFIAPAFGGCNGTPGPVGSVRYFAGGGSGNEKGTAGAGGGGPSVPSGTGPTACAGATNTGGGGGAWNGNPPGAGAGGSGIVIIRYKFQ
Physico‐chemical
properties
protein length:443 AA
molecular weight: 41792,84060 Da
isoelectric point:4,92001
aromaticity:0,06095
hydropathy:-0,17201

Domains

Domains [InterPro]
DC_1946
ATT
1–441
DC_1946
IPR036240
STR
14–158
IPR036240 IPR049304
QGZ17689.1
1 443
Architecture
ATT
ATT 1-441 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC023P
[NCBI] 		2686455 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17689.1 [NCBI]
Genbank nucleotide accession
MN698239 [NCBI]
CDS location
range 37599 -> 38930
strand +
CDS
ATGACAAGTACAATTAAAGTAGACAATATTCAAGATCAAGACGGCAATAACATTATAAATGAAAATGCCAACACAATAACTATCGGTGCAAGTGGCGATACCGTTACTCTTGCATCAGGTGCTTCTCAATCAGGGTTTGGTAGAACAGGAACTGTAGATTGGGATACAACTCCTAAAACAGCTAGTTTTACAGCAGTGTCTGGTAATGGTTATTTTGTAAACACAACAAGTTCAGCTATAACTGTAACGCTACCAGCTTCACCAAGTGCAGGTAACATCGTAGCTGTAATGGATTACGCAAACACAGCTGCAACAAATAATATTACAGTTGCTAGAAACTCATCTAAAATAGATGGAGAAGATATTGATGCAACTATGAAAACTAATGGTCAAAGTTTTACTTTAGTTTATGTAGATTCTACAGAAGGTTGGAAAACAGTAAATAATGCTAATGAACAAATAAATACAACTTCTTTTGTAGCAGCAACAGGTGGCACAATTTCAACATGTGGAAATTTCAAAGTTCATACTTTTACAGGACCAGGATGTTTTACAGTAACTTGTGCAGGAAATTCAGGAGGGTCAAATACAGTAGATTATTTTGTGGTAGCAGGCGGTGGCGGAGGTGGAGCTGGATGTGGTGGCGGAGGTGGTGCTGGTGGATTTAGAGTATCTAATTCTGTTGGTTGTATTCCTGCACCAACAATGTCACCTTTAGCAAATCCAACAGGTTTACCAGTTTCAGCACAAGTCTATCCAATTACAGTTGGAGGAGGAGGTGTAGGTAGACAATTTCCTCCTGGTGGTGATGGAGGTAATGGTTCTAATTCAGTTTTTTCAACAATAACATCAGCTGGTGGTGGTGGCGGTGGTGGACCAGGACAACCAGGTGTAAATGGTGGAAGTGGTGGTGGAAGAGGCCCTGGAACTCCTGTAGGGAGCGGTAATACACCTCCAGTTAGTCCACCTCAAGGTTTTCCAGGAAGACCAGGTCCAAACGGTAGTGGAGGTGGAGGAGCTGGTGGAGCTGATCCTCAACCCCCTGGCGGTGGTGGAGTAGATGGAAGTTTTATTGCTCCTGCTTTTGGAGGTTGTAATGGAACACCAGGACCTGTTGGTAGTGTAAGATATTTTGCGGGTGGTGGATCTGGAAATGAAAAAGGAACTGCTGGAGCGGGTGGAGGTGGTCCCTCTGTTCCTTCTGGAACTGGACCTACTGCTTGCGCAGGAGCAACAAATACTGGTGGTGGGGGAGGTGCTTGGAATGGAAACCCTCCTGGTGCAGGAGCTGGTGGCTCTGGTATAGTAATAATAAGGTACAAATTTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
752b01e8900c319286ab09797d466d8467e39e5d1f80f371ab72dbf452480bd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank