Protein

View in Explore
Genbank accession
UOX39351.1 [GenBank]
Protein name
depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSHYNGCGCGGGCNSCTSHNEIQQAVNDALAFEKENLEQYETNAAQSATDAAKEAAKAAESASAVAQSQANAETAAGTATQAASSVTNTAVVLEETAERIEQAQDLLEEQISAIQTKPVYFEVSTPTSSLVLPESETVFNVRSIYIASARQDVGYGFTFDKATRTITLADEITAEDLAGIDEEFILVTAICDVYSSDDPTSFPIILASNAGASNVGTLQGTSLQNFLTWTMPQAYGAKGDGVTDDTDALYSAFKSTYETLHIPKGTYLISRKLKCALTKNLRVICAPGVVFKLADNVRKNMLVFVGDRTHNFEWFGGEFDGNWAGQGEETLNSSGSFNDMSHGFIVSLFNEVRLDNMYVHSFRGHSMNHAGNKKLHASNLRFNSHIAQAFPQGGSRGDGITGCSEDVLIENVYGFTTDDMVAVFAGILWVEGGTETDSAMVTNLDYLTCKSVTIRNINPWYKTSDIDPATTVYTWNGVVVGGQGGIGVEKVHISNVKGYTQYSGVRVGASDPVGSAPATDYWNTMGSVIIDDISVRVAGASTNQHLYNSIRIGSLTAASTGDAHTCLINSLALSNIQLWPTGNNRTLIGIGYTTIYNLDITNISIRGNYADDTYYAINCAGDRQIAQVSINGVTHNPPSTSSDTVAQAQLILYWAVTYATTAAKISFSGVPLRRASDDGSYLPNFFIASTAVAPYVYGFDAVIRAANNFHSLPRVKGIYCTDRYLGRVQVSPKTGLWEFLDYATTYESSTFGKPSASTFSNYGLITWLPGMVVKCVGSPNESIDSWVYNSNGDWQMQGKTVTNNMVSLITVSSIPSIIAPYAMMTSPVYNDATWPESYGAVVLYGGHQNLRAGAYEDFVSTTGNTYRRTWNTNTSAWNSWYRLPRVVDVPASATASGVAGNIAISSTYLYVCVATNTWVRAALATW
Physico‐chemical
properties
protein length:926 AA
molecular weight: 99821,88810 Da
isoelectric point:4,94723
aromaticity:0,10151
hydropathy:-0,10918

Domains

Domains [InterPro]
DC_0006
STR
17–907
DC_0006
Coil
Unmapped
23–43
Coil Coil IPR011050
IPR012334
STR
231–666
IPR012334
IPR024535
ENZ
235–310
IPR024535
UOX39351.1
1 926
Architecture
STR
STR 17-907 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOX39351.1
1 926
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9209
Central domain 243 727 486 0,9880
C-terminal 728 926 198 0,9595
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-727
C-terminal
728-926

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage GADU21
[NCBI] 		2930399 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOX39351.1 [NCBI]
Genbank nucleotide accession
ON004963 [NCBI]
CDS location
range 9186 -> 11966
strand +
CDS
ATGAGTCATTATAATGGATGTGGATGTGGTGGGGGCTGCAATTCCTGCACATCTCATAACGAGATCCAGCAAGCAGTAAATGATGCACTTGCTTTCGAAAAAGAGAATTTGGAGCAATATGAAACTAATGCTGCCCAAAGTGCTACTGATGCTGCTAAGGAAGCAGCCAAAGCAGCAGAGTCTGCGAGTGCGGTAGCACAGAGCCAGGCGAATGCTGAGACGGCTGCGGGCACTGCAACTCAAGCTGCATCCTCTGTGACGAATACTGCTGTTGTTCTTGAAGAAACAGCAGAACGGATCGAGCAAGCCCAAGACCTGCTTGAGGAACAGATCTCAGCAATTCAGACTAAACCAGTATACTTTGAGGTGAGTACGCCTACCTCTTCTTTGGTTTTGCCTGAGTCTGAGACTGTGTTTAATGTTCGATCTATCTACATTGCTTCAGCACGTCAGGATGTGGGTTATGGTTTTACTTTTGATAAAGCTACTCGAACCATCACGTTAGCTGATGAGATCACTGCTGAAGATCTTGCCGGGATTGATGAAGAATTTATTCTTGTTACTGCTATCTGTGATGTATACAGCAGTGACGATCCCACTTCTTTTCCTATAATTCTGGCTTCAAATGCTGGAGCTTCTAATGTAGGTACTCTACAAGGTACTTCTTTACAGAATTTTTTAACTTGGACTATGCCTCAAGCATATGGTGCTAAAGGGGACGGTGTTACTGATGACACTGATGCCTTGTATTCGGCATTTAAATCTACGTATGAAACTCTTCACATACCTAAGGGTACTTACTTAATTTCACGTAAATTGAAATGTGCATTAACCAAAAATCTCCGTGTTATCTGTGCTCCTGGTGTTGTATTTAAACTGGCAGATAATGTTCGCAAGAACATGCTGGTCTTTGTTGGAGATCGCACCCATAACTTCGAGTGGTTTGGCGGTGAGTTTGATGGTAACTGGGCAGGTCAGGGCGAAGAAACCCTGAATAGCTCTGGTTCTTTCAATGATATGTCTCACGGTTTTATTGTAAGTCTCTTCAATGAAGTCCGTTTAGACAATATGTATGTTCACAGCTTCCGTGGACACTCCATGAACCATGCTGGGAATAAAAAGTTACATGCCTCTAATCTGAGGTTTAACTCCCATATTGCACAAGCATTCCCTCAAGGGGGATCTCGTGGTGATGGTATTACTGGGTGCTCAGAAGACGTACTCATTGAGAACGTTTATGGCTTTACTACTGATGACATGGTAGCAGTCTTTGCTGGTATCCTTTGGGTTGAAGGGGGTACTGAAACAGACTCTGCTATGGTAACTAATTTAGACTATCTTACCTGTAAATCAGTAACTATCCGTAACATTAACCCTTGGTATAAAACCAGTGATATCGATCCTGCTACCACCGTTTATACCTGGAATGGGGTTGTTGTTGGTGGTCAGGGTGGTATTGGAGTTGAGAAAGTCCACATCAGTAACGTTAAAGGGTATACCCAGTATAGTGGTGTGCGTGTAGGTGCATCTGATCCTGTAGGTTCAGCTCCTGCTACAGACTATTGGAATACCATGGGTAGTGTAATCATTGATGATATCAGTGTACGAGTTGCAGGTGCATCCACTAATCAGCATCTGTATAACTCTATCCGCATTGGTTCACTGACTGCGGCAAGCACAGGTGATGCACATACCTGCCTGATTAACTCCCTGGCTTTATCTAATATTCAGCTCTGGCCTACTGGGAATAACAGGACATTGATTGGTATTGGATATACTACGATCTATAACCTGGATATCACTAACATCAGTATCCGAGGGAACTATGCTGATGATACCTATTATGCTATTAACTGTGCAGGGGATCGTCAGATTGCACAGGTAAGCATAAATGGTGTTACTCATAATCCACCATCTACCTCCAGTGATACTGTGGCACAAGCCCAGCTTATTCTGTACTGGGCAGTCACTTATGCAACTACAGCGGCTAAAATTAGCTTCTCTGGGGTTCCTCTGAGAAGGGCATCTGACGATGGATCCTATCTCCCGAACTTTTTTATAGCATCAACAGCAGTGGCTCCTTATGTGTATGGTTTTGATGCTGTAATCCGTGCAGCTAATAATTTCCACTCTTTACCTCGTGTTAAGGGTATTTACTGTACTGATCGGTACTTGGGCCGTGTGCAGGTATCCCCAAAAACAGGGTTATGGGAATTTTTAGACTACGCCACTACGTATGAAAGTAGTACCTTTGGTAAACCCTCAGCGAGTACATTCAGCAACTATGGTTTGATTACATGGTTACCTGGGATGGTTGTTAAGTGTGTGGGTTCTCCCAATGAGTCTATTGATTCATGGGTGTATAATTCCAACGGTGATTGGCAGATGCAGGGTAAGACTGTAACCAATAACATGGTTTCTCTTATCACAGTCTCATCCATACCTTCTATCATAGCACCTTATGCCATGATGACTTCGCCTGTTTATAACGATGCTACTTGGCCAGAATCTTATGGTGCTGTTGTATTGTATGGTGGACACCAGAACTTACGTGCTGGGGCATACGAAGACTTTGTATCGACTACTGGCAATACCTACAGAAGAACCTGGAACACTAATACCTCAGCATGGAATAGCTGGTACAGGTTACCTCGTGTAGTTGATGTACCTGCCTCAGCTACTGCATCCGGGGTTGCTGGAAATATTGCAATATCTTCCACATATCTTTATGTGTGTGTTGCAACAAATACCTGGGTTCGCGCAGCTCTAGCAACCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c9775d0fd0f8c6f32bcf1bcab3ac1d4e42302ae86e6983f57562aa69714104a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two novel phages, Klebsiella phage GADU21 and Escherichia phage GADU22, from the urine samples of patients with urinary tract infection Salih Dogan,H., Karaynir,A., Yilmaz,U.I., Basgoz,B.B., Hosbul,T. and Bozdogan,B. 2024 38238612 GenBank