Protein

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Genbank accession
AUS02788.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTTRVSNDLIGGPAGPDGSSLLVTATDSTTARTLGDHFADAVNVKDFGAVGDGVTDDTVAIELAISSGRTVLIPDGYDCLINPITIDIDNTDIRISRSASISINVVSENSGITITGSYVSITGGTIKASTENVYFTNYLVYANDAFAVTISGVRIYYPQKSSYVGDGFNIPYNKGVLGLRAPNSIIENCVIYNGEGAGIYNYRENNTIQGNRVFNNILGIALAYGNSVGFGDNVIVDANHIYDNNACLDYSGADGILSWRDTRGHSIVNNIISGSGEHGTYIQSRDNSVVGNTVFGNRDSGIKCGGGKGSVISSNVCYDNGVGADNGDGSELYVQSPFGNMTINGNSCSNNVTGTGSFGIRVVWLEDKADPSSEDNVVVSNNVVSGTFVNGDMRLSGNGNFTVTGNKCVGQLSISQSTTSQPTMDYVNVSNNNVDVLYIDKISNCLVTSNYMNDLELSSSGQKTIIKDNIMRGQTSRLNMNDWDEISGNRITFTGSDSLLLQGSNAASCSYKRVINNVFDTNQPIIDFTSEGVSGDHITLQNNEFSVNSTNSLLIAGWCKYCLITGNRSPIPGTVTNLRNGTDTGYNIVTNNIGDNFSVGTTDIKENNIEF
Physico‐chemical
properties
protein length:611 AA
molecular weight: 64941,64420 Da
isoelectric point:4,44284
aromaticity:0,07529
hydropathy:-0,19149

Domains

Domains [InterPro]
IPR012334
STR
30–350
IPR012334 IPR006626 IPR006626
IPR012334
STR
41–360
IPR012334
IPR024535
ENZ
42–84
IPR024535 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
67–420
IPR011050
IPR007742
CBM
166–325
IPR007742
AUS02788.1
1 611
Architecture
STR
STR 30-420 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUS02788.1
1 611
Domain Start End Length (AA) Confidence
N-terminal 1 57 57 0,9490
Central domain 58 600 544 0,9947
C-terminal 601 611 10 0,3231
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-57
Central
58-600
C-terminal
601-611

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02788.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 122188 -> 124023
strand -
CDS
ATGACAACTCGCGTATCGAATGATTTAATTGGTGGTCCAGCCGGCCCAGATGGATCTAGTTTACTAGTTACTGCTACTGACTCAACAACTGCTAGAACTTTAGGTGATCACTTTGCTGATGCTGTAAACGTAAAGGATTTTGGAGCTGTTGGTGATGGCGTTACTGATGATACTGTTGCTATTGAGTTAGCTATATCAAGCGGGAGAACAGTTTTAATTCCTGATGGTTATGATTGTCTAATTAACCCTATTACTATTGATATTGATAACACTGACATACGCATATCAAGATCAGCATCAATAAGCATAAACGTTGTGAGTGAGAACTCAGGAATTACAATCACAGGGTCATATGTGTCAATAACAGGAGGAACTATTAAAGCCTCAACTGAAAATGTGTATTTTACTAACTATCTCGTATATGCTAATGACGCATTTGCAGTTACTATATCAGGAGTTAGGATATATTATCCACAGAAATCATCATATGTTGGTGATGGATTTAATATACCATACAACAAAGGAGTTCTTGGACTGCGTGCGCCTAACTCGATTATTGAGAATTGCGTTATATATAACGGGGAAGGTGCTGGCATTTATAATTATAGAGAAAATAATACAATACAAGGAAATCGAGTTTTTAATAATATTTTAGGAATTGCGTTAGCTTATGGTAATAGTGTAGGTTTTGGTGATAATGTGATTGTGGATGCAAACCACATATACGATAACAATGCGTGTTTGGATTACTCGGGTGCGGATGGCATATTATCATGGAGAGATACTAGAGGGCACTCGATAGTTAATAATATAATATCAGGTAGTGGTGAGCACGGAACATACATACAATCAAGGGACAATTCTGTTGTTGGTAATACTGTCTTTGGCAATAGAGATTCAGGTATAAAATGTGGGGGAGGTAAAGGATCAGTAATATCTAGTAATGTCTGCTATGATAATGGAGTTGGTGCTGATAACGGTGATGGCAGTGAACTATATGTGCAATCTCCATTTGGAAATATGACTATTAATGGAAATTCATGCTCTAACAATGTTACTGGTACTGGTTCTTTTGGTATACGAGTTGTCTGGTTGGAAGATAAAGCTGACCCATCTAGCGAAGATAATGTTGTAGTATCGAATAATGTGGTTAGCGGCACTTTTGTTAACGGCGATATGCGTTTATCAGGAAATGGCAATTTTACTGTTACTGGGAACAAATGTGTTGGTCAATTATCGATATCACAATCTACTACATCACAACCTACTATGGACTATGTAAATGTTTCAAATAACAATGTTGATGTTTTGTACATTGATAAGATTTCCAACTGCCTAGTAACAAGCAATTACATGAATGATTTAGAACTATCGTCATCTGGTCAGAAAACTATCATCAAAGACAACATAATGCGCGGCCAAACCTCAAGACTAAACATGAATGACTGGGATGAAATATCTGGTAATAGGATAACATTTACAGGGTCTGATTCGCTATTACTTCAAGGAAGTAATGCTGCATCATGTAGTTATAAGAGGGTTATTAACAACGTATTTGATACTAATCAACCTATAATTGATTTTACTTCTGAGGGAGTCTCTGGGGACCATATAACGTTACAAAATAATGAGTTTTCTGTAAATTCAACAAATTCACTACTAATTGCAGGATGGTGCAAGTATTGCTTAATTACTGGTAATCGATCCCCGATACCTGGAACGGTTACAAATCTTAGAAATGGAACTGATACTGGATACAATATAGTTACAAACAATATCGGAGATAACTTTAGTGTTGGAACAACTGATATAAAAGAAAACAACATAGAATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c757f072c744ed7b52b32c7ddb6f4a2c228dfd0176e66079a57d095f8e90ef8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8388
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank