Protein

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Genbank accession
QYC51673.1 [GenBank]
Protein name
putative receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSFFAGRLNNVPTFSLKNEGGGDINRHINPDDNTLFHSSMPHVLITEEYEAQLNARDNGYWTCAMPGRISSLLANDANLVVLTEVEYYVGNTICRRMLYGGATGVGAANWQSQWVSIQIIGSRPITIPHFFGAFGTTFVASNDVIADHGFFSESNPGGNVSQKLLYGTGRKLMWSGSSTWESSQGASNTYFEGGQTVPNSPNYYFDVGHLIPPSGAQRGFDSFYIKAGHPRIEMFYRNAATGSTSNPQPPQLPAGTVGYQLHTFSNRYNGGGGVALDAGQAAALAPNDFSYTNSSVRRDGEAREINYGFGFAKVRWYVTNLRYNGWGYDVTYQPFAGNSILLSPKNFVIKDVNLMNTAFKFINLVSPGNGWNRPDMHLTSPNIYRGNVQSGLEAGDIPWNGVETGGMGAGTWYGAGSNWGSTTLALYKFQPSASWYVNSTVPSIGNQWGDVWSPGQIPLRLFGNRAAVVEVSGGAFQLSANQVTGIQNANLGLNDSRNGAVVMTIVFNDITWFLASGRGVYNPMRWNGGGSLPASQMRVTGYGNSTYHIRHQILSLPVGGYVPFYVCRCGSMASYGSDGSSLADHSTGFYTVIFYIRNIGNGEVEFSCELAGNPIVSIPGGSQNDSSKVLGDYNAIRLPSMRITVQRLV
Physico‐chemical
properties
protein length:649 AA
molecular weight: 70362,61580 Da
isoelectric point:7,18885
aromaticity:0,12327
hydropathy:-0,22465

Domains

Domains [InterPro]
IPR059609
RBD
1–648
IPR059609
QYC51673.1
1 649
Architecture
RBD
RBD 1-648 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC51673.1
1 649
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,0706
Central domain 91 289 200 0,3475
C-terminal 290 649 359 0,7642
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-289
C-terminal
290-649

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage KEY
[NCBI] 		2821255 Uroviricota > Caudoviricetes > Demerecviridae > Keyvirus key >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC51673.1 [NCBI]
Genbank nucleotide accession
MZ616364 [NCBI]
CDS location
range 113697 -> 115646
strand +
CDS
ATGAGTTTTTTCGCCGGACGACTAAATAATGTCCCAACATTCTCCCTGAAGAATGAAGGTGGGGGTGACATAAACCGCCATATAAACCCTGATGACAATACACTTTTCCACTCTAGTATGCCACATGTACTGATTACTGAAGAGTACGAAGCACAATTAAATGCTAGAGATAACGGATATTGGACTTGCGCCATGCCGGGTAGGATCTCTAGCTTACTAGCAAATGACGCCAATTTAGTAGTTTTAACAGAAGTAGAGTATTACGTAGGTAACACAATCTGTAGACGTATGCTTTACGGTGGGGCTACAGGAGTTGGTGCAGCTAACTGGCAAAGCCAGTGGGTTTCAATACAAATTATCGGATCTAGGCCAATTACTATTCCACACTTCTTTGGTGCGTTTGGTACTACGTTTGTTGCTAGTAACGATGTAATTGCTGATCATGGATTCTTTAGTGAAAGTAACCCAGGTGGTAACGTTTCGCAGAAGCTGCTATATGGAACAGGCCGTAAACTGATGTGGTCTGGATCTAGTACTTGGGAAAGTTCTCAGGGTGCTTCTAACACTTATTTTGAGGGCGGACAGACAGTTCCTAACAGCCCAAATTATTACTTTGACGTAGGTCATCTTATTCCACCTTCTGGTGCACAACGTGGTTTTGATAGTTTTTATATTAAAGCTGGTCATCCTAGAATTGAGATGTTTTATAGAAACGCTGCAACAGGTAGTACGTCTAACCCACAACCGCCTCAACTACCTGCGGGTACTGTTGGTTATCAGTTACATACCTTCTCTAATAGGTATAACGGAGGTGGAGGTGTAGCCTTAGACGCAGGTCAAGCTGCTGCGTTAGCGCCTAACGACTTCAGTTATACTAACAGCTCAGTAAGACGCGATGGCGAGGCAAGGGAAATAAACTACGGGTTTGGGTTTGCCAAAGTAAGATGGTATGTTACCAATTTACGTTACAATGGTTGGGGTTATGATGTTACTTATCAACCTTTCGCAGGCAATAGTATTCTCCTGAGTCCTAAGAACTTCGTTATTAAAGACGTAAACTTAATGAACACAGCATTTAAATTCATTAACTTAGTATCTCCAGGTAACGGGTGGAATAGGCCTGATATGCATCTTACTAGTCCTAATATTTATAGGGGTAACGTACAGTCTGGATTAGAAGCTGGTGATATACCGTGGAATGGTGTAGAAACTGGAGGTATGGGAGCAGGTACTTGGTATGGAGCGGGAAGTAACTGGGGTTCTACTACTTTAGCCTTATATAAATTCCAACCGTCTGCATCTTGGTATGTTAATAGTACTGTGCCATCTATAGGTAACCAATGGGGTGATGTATGGTCTCCGGGTCAAATACCTTTGAGATTGTTCGGTAACCGAGCCGCCGTCGTAGAAGTAAGTGGTGGTGCGTTCCAGTTATCCGCAAACCAAGTAACAGGAATACAGAATGCTAATTTAGGTCTTAATGACTCTAGAAACGGTGCTGTAGTAATGACTATCGTATTTAACGATATCACATGGTTCCTAGCAAGTGGTCGTGGTGTTTACAACCCAATGAGGTGGAATGGTGGGGGTAGTTTACCTGCTAGTCAGATGCGTGTTACTGGATACGGTAACTCTACGTATCATATTAGACACCAGATACTAAGTCTACCTGTGGGAGGTTACGTACCTTTCTACGTTTGTAGATGTGGTTCCATGGCAAGTTATGGTAGTGATGGTAGTAGTCTAGCGGACCATAGTACGGGCTTCTACACTGTAATATTTTATATTAGGAATATAGGTAATGGTGAGGTAGAATTTTCCTGTGAGCTAGCAGGTAACCCTATTGTAAGTATTCCTGGCGGATCACAAAACGATTCATCTAAAGTTCTAGGTGACTATAACGCTATACGTTTACCAAGTATGCGTATAACTGTACAAAGACTAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e93cf9ff6e29f4903d7d5f52a3c90a8dfd6e7ea0b99edab9d96dc10270922183
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2304
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Broad-host-range lytic Erwinia phage Key with exopolysaccharide degrading activity Zlatohurska,M., Gorb,T., Romaniuk,L., Shenderovska,N., Faidiuk,Y., Zhuminska,G., Hubar,Y., Hubar,O., Kropinski,A.M., Kushkina,A. and Tovkach,F. 2023 — GenBank