Protein

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Genbank accession
WPJ72064.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTLPNFPLGLETSESSVLHGFVNTGVMEHSEGAIMSIPEGNGTVGVPSQIRYNSDTDSYEGFYADGGWLPFGGGGVRWEMLSYAPSHSLSAGRGYFINNTSGVSTVVLPVVTKVGETVSICDAAGKFATYPLTLDPNGKSIYGSSDTMLVSTDNMAATFTWTGDEMGWVVTAGVGLGQGRVYSREIFTQTVSSVTSSITLSYQPEIVDVYIDGKRLSESKYTLNGFSVDFAPAIPSGSEVQIIEYTPIQLGNGGNSGGAGTQVTWVYNDGSAVGGETSITVELAGGEISEIYINGVRQQANEGFTFDSTTNVITLAEALEAGDELIAKIGGDPTLYNQIDRTPYEVARAANVPVSQVILSSNTSTTLNGKTIVFDTNAQKAWGLPSGIPSGATIVSVSGSNLTYAPGNVVVALNNIPSFFDNEYSVSIVCRDVNALRALSVSPGKKILLLGYQSGTPGVGGGVLYSSDNTSLPDDGVRVFVTANGTRVIRETNGFLYASQAGCVGGGADDTAALLRAAAAGYDIFVDGDYTITDANITLSAGQKWFGTGSVRQNCSSLSPSPADTTVWYPPSSYPLFHLLNGSKVYDLTLYPAFEAVAVESDGEFVNNECRFEGRTWYDGILCFGDNSRILNNKIYDCGQWLSGVSYALRGDGIFISNSSKQTYHVTVEGNYVQGSAKNGILLIGAVRSDVTKNKFIANRMSAIQIGYLNNVALNVSELNITNNIGSFNGADSFDMNNSSGLDVSNALSYVNLNNNTFSSNGWIYPTRAGQLSRSGTKQLTPDGGGFTLVNIRRLYAQGNVIIDNAKLCVYMVNCNGCEILNNKFYKYTSHPDNDTDGFYIDNSIDCVVANNHAEVPKVAYKFVGQSSGTLVENNTTITNVSGAHGIVCSEPSPLFKFNNNKLTINSGQFIYGYSFPHNGCTFIASVLGTVTYTGLNLARFEDNTYNFPSGNVSFTNCNSIMIDGLKIDSSSTSAGGAVTVSGLQGVSSIFRPEIIQRGTTAGLLITGGTFTLNIERGFVANTNGPTSNNLRVESGTAGMVIRTDSLNLLVGSPEWGASTHQQIPWA
Physico‐chemical
properties
protein length:1071 AA
molecular weight: 113601,97110 Da
isoelectric point:4,73710
aromaticity:0,09524
hydropathy:-0,06601

Domains

Domains [InterPro]
DC_1946
ATT
1–1068
DC_1946
G3DSA:3.30.2020.50
ATT
341–421
G3DSA:3.30.2020.50 IPR012334 IPR006626
IPR011050
STR
512–774
IPR011050 IPR006626 IPR006626
IPR006626
Unmapped
629–662
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
738–943
IPR011050
WPJ72064.1
1 1071
Architecture
ATT
ATT 1-1068 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPJ72064.1
1 1071
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,9524
Central domain 513 1060 549 0,9908
C-terminal 1061 1071 10 0,4686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-1060
C-terminal
1061-1071

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CRW-SP2
[NCBI] 		3079598 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Paratyphi B
[NCBI] 		57045 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPJ72064.1 [NCBI]
Genbank nucleotide accession
OR464140.1 [NCBI]
CDS location
range 34822 -> 38037
strand -
CDS
ATGGCCAATAAACCCACATTGCCGAATTTTCCTCTCGGTCTTGAAACTTCAGAATCTTCAGTTTTACACGGTTTTGTCAACACTGGCGTCATGGAGCACTCCGAAGGCGCTATCATGTCTATTCCTGAAGGGAATGGAACGGTTGGTGTTCCTTCACAGATTCGTTACAATTCCGACACTGATTCCTATGAAGGTTTCTATGCCGATGGCGGCTGGCTCCCGTTTGGTGGCGGTGGGGTGCGTTGGGAAATGCTGTCTTATGCTCCCTCTCATTCCCTCAGCGCCGGGCGCGGCTATTTCATCAACAACACCAGTGGGGTGTCGACAGTAGTCCTTCCGGTGGTGACGAAGGTGGGAGAGACGGTTTCTATCTGTGATGCTGCGGGTAAGTTTGCGACGTATCCATTAACGCTGGATCCCAACGGTAAGAGCATCTATGGATCGTCTGATACCATGTTGGTGTCTACAGATAATATGGCTGCGACTTTCACCTGGACCGGAGATGAAATGGGATGGGTGGTAACAGCGGGCGTCGGTCTCGGCCAGGGGCGTGTGTACAGTCGAGAGATCTTTACCCAGACCGTGTCTTCTGTGACTTCCTCTATAACCCTTTCATACCAGCCAGAAATTGTCGATGTCTACATTGACGGGAAGCGTTTGTCTGAAAGCAAATACACCTTAAACGGATTCTCTGTTGATTTTGCTCCAGCTATCCCTTCTGGTTCCGAAGTGCAGATCATTGAATACACCCCTATCCAATTGGGTAATGGTGGGAATTCTGGCGGCGCGGGAACACAAGTGACCTGGGTTTACAATGATGGTTCAGCTGTCGGCGGTGAAACCTCAATCACAGTCGAACTCGCTGGCGGTGAAATATCTGAGATTTATATCAATGGTGTTCGTCAGCAAGCGAATGAAGGGTTTACTTTTGACTCTACCACCAATGTAATCACTCTGGCAGAAGCCCTGGAAGCCGGGGATGAACTGATTGCAAAGATCGGGGGTGATCCAACTCTGTATAATCAGATAGATCGCACTCCGTATGAAGTGGCGCGAGCGGCTAACGTTCCGGTTTCTCAAGTAATTCTGAGCAGCAATACCTCAACCACACTGAACGGGAAGACTATCGTTTTTGATACCAATGCTCAAAAAGCCTGGGGTCTGCCTTCTGGTATTCCTTCAGGGGCGACGATAGTTTCTGTCTCGGGAAGTAACCTGACGTATGCGCCGGGGAATGTGGTTGTTGCTCTCAACAATATTCCTTCATTTTTTGATAATGAGTACAGTGTTTCGATTGTATGTCGTGATGTGAATGCCCTTAGAGCATTGTCAGTTTCTCCTGGTAAGAAAATTTTGCTTCTGGGCTATCAGTCGGGAACGCCGGGTGTTGGCGGCGGGGTACTGTATTCTTCTGATAACACCAGCTTACCAGATGATGGGGTTCGTGTGTTTGTCACAGCTAATGGCACTCGAGTCATAAGGGAAACCAACGGGTTTTTATATGCTTCACAGGCCGGGTGTGTCGGTGGCGGCGCGGATGATACCGCAGCATTGTTACGGGCGGCGGCGGCTGGTTATGATATTTTTGTCGACGGTGACTATACCATAACAGATGCCAATATCACTTTGTCGGCTGGGCAAAAATGGTTCGGGACTGGTTCTGTTCGTCAGAATTGTTCTTCTCTGAGTCCTTCTCCGGCAGATACGACGGTTTGGTATCCGCCGTCTTCATATCCGTTATTCCATCTGTTGAATGGTTCAAAAGTTTACGATCTGACCCTTTACCCGGCTTTTGAGGCCGTGGCTGTGGAATCTGATGGTGAATTTGTGAATAACGAATGTCGTTTTGAGGGAAGGACTTGGTATGACGGGATCCTTTGCTTTGGGGATAACTCTAGGATTCTGAATAACAAAATATATGACTGCGGACAGTGGTTGAGCGGGGTTTCCTACGCGCTTCGCGGGGATGGTATTTTTATCTCCAATTCTTCCAAACAGACATATCACGTGACAGTAGAAGGAAATTATGTTCAGGGGAGTGCCAAAAACGGTATTTTGTTGATTGGTGCAGTTCGTTCTGATGTCACCAAGAACAAATTCATAGCGAATCGTATGTCAGCTATCCAAATAGGATATTTGAATAACGTTGCTCTGAACGTATCCGAATTGAACATAACCAACAATATTGGTTCTTTCAACGGGGCGGATTCCTTTGACATGAATAATAGCAGCGGGCTTGATGTTTCCAATGCCTTGTCATATGTTAATCTGAACAACAATACGTTTTCCAGTAATGGGTGGATTTATCCTACCCGCGCTGGCCAACTTTCCCGCAGCGGAACTAAACAGTTGACTCCCGATGGTGGTGGTTTTACTTTGGTAAACATCCGTCGGTTGTACGCGCAGGGGAACGTTATTATAGATAACGCCAAACTGTGTGTCTACATGGTGAACTGTAATGGATGTGAAATCTTGAATAACAAATTTTATAAATACACCAGTCATCCAGATAATGACACCGACGGGTTTTATATTGATAACTCAATAGACTGTGTTGTTGCCAATAACCACGCCGAAGTGCCGAAGGTGGCATATAAATTTGTAGGACAGTCTTCCGGAACTTTGGTAGAAAATAACACGACGATCACGAATGTTTCTGGTGCCCACGGTATAGTTTGCTCTGAACCTTCTCCGTTATTTAAATTCAATAATAATAAACTAACCATCAACAGTGGACAGTTTATTTACGGATATAGCTTCCCCCACAACGGTTGCACGTTCATTGCTTCTGTGTTGGGTACTGTCACTTATACCGGGTTGAATTTGGCGAGATTTGAAGATAACACATATAACTTCCCTTCTGGGAATGTTTCGTTCACGAATTGTAATTCTATCATGATAGACGGTTTGAAGATAGATTCTTCTTCTACGTCTGCGGGGGGAGCGGTTACAGTTAGTGGACTCCAGGGGGTATCCTCTATATTTCGGCCGGAAATTATTCAGCGAGGCACGACAGCCGGGTTACTCATTACTGGAGGAACATTCACCCTTAATATTGAAAGGGGATTTGTTGCCAACACGAACGGACCAACATCCAATAACTTGAGGGTGGAAAGCGGTACTGCCGGCATGGTGATCAGGACTGATTCTCTCAATTTACTTGTTGGTTCTCCAGAGTGGGGCGCTTCTACTCACCAACAGATACCTTGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1aa544a016bce83430450f2989f5a4497f56bbace7fc842a8a26669019e141d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7372
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50