Protein

View in Explore
Genbank accession
QIG66004.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTQPLIIYQYANPEHSVIKDSRGNFIPVNPDSRQYQEFLKNHDLSEVRVYTAPKVDLNAYLAAVRYKFETGGIYINGMFVATDDRSKTMIIGARAMADTNKDYVLKWKLGNGNFINLDAGTIIYISNTVLQHVQKCFDIEGDISDLIAKKEIRTVEQIDQLFKEKLEKGA
Physico‐chemical
properties
protein length:170 AA
molecular weight: 19368,89330 Da
isoelectric point:6,29915
aromaticity:0,10000
hydropathy:-0,33000

Domains

Domains [InterPro]
DC_2197
STR
2–169
DC_2197
IPR025484
STR
54–153
IPR025484
QIG66004.1
1 170
Architecture
STR
STR 2-169 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG66004.1 [NCBI]
Genbank nucleotide accession
MT028491.1 [NCBI]
CDS location
range 197779 -> 198291
strand +
CDS
ATGACACAACCATTAATAATCTATCAATACGCAAACCCGGAACATTCTGTCATCAAGGATAGCAGGGGTAATTTTATCCCTGTAAACCCTGACAGTAGACAGTATCAGGAATTCCTCAAGAACCATGACTTGAGCGAAGTTCGCGTTTATACGGCCCCTAAAGTCGATTTGAACGCATATCTAGCGGCTGTTCGATATAAGTTTGAAACGGGTGGCATCTATATCAACGGAATGTTTGTTGCAACCGACGACCGTTCCAAGACGATGATAATTGGCGCTCGCGCTATGGCAGATACCAATAAAGACTATGTTCTGAAATGGAAACTAGGCAACGGTAATTTCATCAACTTGGATGCTGGAACCATCATTTACATTTCAAACACGGTTCTCCAACATGTTCAAAAATGTTTCGATATCGAAGGTGATATTTCTGATTTGATTGCCAAAAAAGAAATCAGAACGGTTGAACAGATTGACCAACTATTTAAAGAGAAATTAGAAAAAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb84e53acddecf44ac345feecbd8543939443e4b839f96658ecbac00c841e061
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8509
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank