Protein

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Genbank accession
QXM18609.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,76
Protein sequence
MANIKIQNLPVKIPLDTMKIPTGGFGDYAVTIGQIAEHFKLNNGFATKDQLDLHTNDKENPHNVTKEQVGLGNVDNTSDVNKPVSFAVQEALNKKSDKNNTYTKSEVDRIEVNLEDLIAAYANTGNKAYKTLVDAQSDIENIPINSAVFILNDYNADNNGLYQWDGTALNKSSLDYLEKSRHYTDKEISSLTNKITLKKSDDPDIIPILADKDGKALVYYDKNKDLFVGGGLLEQIFTILSQIKRYEDDRYIAILVDALGNILLGWDKLKDEPVGFTTSSLSMINTDKRFYYFSKSLEVKDVNHVVVYGQSLGLGATAINILSNSQPYFNITFNTGPRQDSPATSIIPLVEMFNNPSSDGYDNRGETVCSGMANYASVKMMTESGIDPQEHVIFASTAGHGSYRIDQLNKGTAWYNFLLDHVTKAKNLNAGKSFQVNLVPWIQGENDAITGTQTPYSVYKNKLIQLQKDVDSDIKEITGQVDDVRFMTYQVSYAARTHPDIAKAQLDLSKESDKFMLSTPMYHFPYAVDNVHLTNVGYKWFGAYIGRAYKQYVIDGRKPDFLNPVSAYVNGKFIHVKFYAPNAPLVLDNTTLAPTTDYGFRVTDNGNTAGISNITVEGEVLTIELQSEPVGDVYVRYALDYLGTGINLTGGASGNLRDSTTDSVDIGGVSKPLYHVCPHFEMKVNKIKGI
Physico‐chemical
properties
protein length:690 AA
molecular weight: 76519,07270 Da
isoelectric point:5,34766
aromaticity:0,09710
hydropathy:-0,35957

Domains

Domains [InterPro]
DC_1069
STR
50–584
DC_1069
SSF52266
STR
303–551
SSF52266 DC_0473
IPR036514
STR
306–553
IPR036514
IPR005181
ENZ
397–550
IPR005181
QXM18609.1
1 690
Architecture
STR
RBD
STR 50-584 | RBD 585-685 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXM18609.1
1 690
Domain Start End Length (AA) Confidence
N-terminal 1 558 558 0,7040
Central domain 559 679 122 0,5262
C-terminal 680 690 10 0,8767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-558
Central
559-679
C-terminal
680-690

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Phab24
[NCBI] 		2855484 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXM18609.1 [NCBI]
Genbank nucleotide accession
MZ477002.1 [NCBI]
CDS location
range 85303 -> 87375
strand -
CDS
ATGGCTAATATAAAAATTCAAAATCTACCAGTGAAAATACCATTAGATACTATGAAAATCCCTACTGGTGGATTTGGTGATTATGCTGTAACAATTGGTCAAATCGCAGAACATTTTAAATTAAATAACGGATTTGCAACAAAAGACCAATTAGATTTGCATACCAACGATAAAGAAAATCCCCACAATGTAACTAAAGAGCAAGTAGGTTTAGGTAATGTTGACAATACCTCGGATGTTAATAAACCTGTCAGTTTTGCTGTACAAGAAGCGCTGAACAAGAAATCAGATAAAAATAATACCTATACCAAGTCAGAAGTAGATAGAATTGAAGTAAATTTAGAAGACCTAATTGCAGCATATGCAAACACAGGAAACAAAGCATACAAAACATTAGTAGATGCCCAGTCTGATATTGAAAATATTCCAATTAACAGCGCAGTATTTATCTTAAACGATTATAATGCAGATAACAACGGATTGTATCAGTGGGATGGTACAGCACTTAATAAATCTTCTCTCGACTATCTTGAGAAATCGAGACACTATACAGACAAAGAAATATCAAGTCTTACAAATAAGATAACTTTAAAAAAATCTGACGACCCCGATATTATTCCGATACTTGCAGACAAGGATGGGAAAGCCTTAGTATATTATGACAAAAACAAAGATTTGTTTGTTGGGGGTGGTTTGTTAGAGCAAATTTTTACAATATTGTCACAAATCAAACGATATGAAGATGATAGATATATTGCCATATTAGTTGATGCTTTAGGTAATATTTTGCTTGGTTGGGACAAGTTAAAGGATGAACCTGTAGGCTTTACTACAAGCAGCCTCTCAATGATAAACACTGATAAAAGATTTTACTATTTCTCAAAAAGTCTTGAAGTAAAAGATGTAAACCATGTAGTTGTTTACGGGCAATCTCTTGGTTTAGGGGCAACTGCTATTAATATTCTAAGCAATTCTCAACCTTACTTTAATATAACTTTCAATACTGGACCAAGACAAGACTCACCAGCAACCTCTATTATACCATTAGTAGAGATGTTCAACAACCCTTCATCTGATGGTTATGACAACAGAGGAGAAACAGTTTGTTCAGGTATGGCAAACTACGCGTCTGTGAAAATGATGACCGAATCTGGTATAGACCCACAAGAACACGTAATTTTTGCCAGTACAGCAGGACACGGAAGTTATCGAATTGATCAGTTAAATAAAGGAACTGCTTGGTATAATTTTTTACTTGATCATGTTACAAAAGCCAAGAACCTAAATGCTGGTAAAAGCTTTCAAGTTAACTTAGTACCGTGGATACAAGGTGAAAATGATGCTATTACGGGGACTCAGACTCCTTATAGTGTCTATAAAAATAAACTCATACAGCTACAAAAAGATGTTGATTCTGATATAAAAGAAATTACAGGACAGGTTGATGATGTTCGATTTATGACATATCAAGTATCTTATGCTGCTAGAACACATCCCGACATTGCTAAAGCTCAACTAGATTTGTCAAAAGAGAGTGACAAATTTATGTTATCCACACCGATGTATCATTTTCCTTATGCTGTCGATAACGTCCATTTAACAAATGTTGGTTACAAATGGTTTGGGGCTTACATTGGAAGGGCGTATAAACAGTATGTAATTGACGGTAGGAAGCCAGATTTTTTAAATCCTGTATCTGCCTATGTTAATGGAAAATTCATCCATGTTAAGTTTTACGCACCTAATGCACCATTAGTTTTGGATAATACCACTTTAGCCCCGACAACTGATTATGGTTTTAGAGTAACAGATAATGGAAACACCGCAGGGATATCTAACATAACGGTAGAAGGTGAAGTTCTTACCATAGAACTACAATCCGAACCAGTAGGTGATGTGTATGTACGTTATGCACTGGATTATCTAGGAACTGGTATAAACCTGACAGGTGGTGCTTCAGGCAACCTTCGTGATTCAACAACAGATAGTGTAGATATTGGTGGTGTTTCTAAACCACTTTACCACGTTTGTCCACATTTTGAAATGAAAGTAAATAAAATTAAGGGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
939f304da260ec11c0c41a335a8a5f24547727b9806e9e3b4abd50b631c3f188
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Colistin- phage combinations decrease antibiotic resistance in A. baumannii via changes in envelope architecture Wang,X., Loh,B., Altamirano,F.G., Yu,Y., Hua,X. and Leptihn,S. 2021 — GenBank