Protein

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Genbank accession
ADP00057.1 [GenBank]
Protein name
tail tube B
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MAAINQRIPNFLGGVSQQPDTIKFPGQLRVCDNAVPDVTFGLMKRPPGEFVKTLTNANASGYWYDILRDGDEKYLVQMTASSSYSGTKPIRIWNLLTGVEQSLTNSNGDSLFQYMQQTGTTKPYAIQSVQDYTIITNPQKTIGTDGNTAVPLNSGDYAFARLDTIAYNTEYVLYTGSAPSANTYYRVTSLKVDYTNTQGGSAVGSTWDDTNEDGRYAGQLGFSFSGGSAVTIPGGQVATEDVEGTLLINGQSFITSQDPQYQADDSSSTSTSGDGSDFIGYVSDYDTRYTATVTLKNGGIIKGTKAQAEACYIDVVVEGKYYRISVEAVEPVETYQGVSSIAYYKTAQSPDKGRASMATILKGLETAVNSDLANVTAEIYGSGLYLYGSAAPNVNFLGGAVNEAMNVFGNTAQDVARLPSMCKHGYIVQVANSENVDADNYYVKFLADNGSGGSGKWEETVRPHNFSSGSDPMVKGLDPATMPHALVNNRNGTFTFKKLDETTANADNTDNYWKYREVGDDETNPFPSFKGLEIQKIFFHRNRLGFVANEQVVMSRPGDYFNFFVVSAITTSDDNPIDITVSDIKPAFINHVLPVQKGVMMFSDNGQFILFTESDIFSPKTARLKKISSYECDDALQPVDMGTSVMFSSSVSAYTRTYEATVVDDDVPPKIVEQTRVVPEFLPKTVDTTANTTSLGIVSYGETNTNELYHYKYFDSGERRDQSAWYSWTLQGTLQYMVYTAGTFYVVTKQDNDYILCRHEYVTDATSARTYVVGGVAADVGSPLKTARWFEGCLDNMTIPTAITYTAQGGSVTGPDFTDLTIPYTPTSADNLYAVALSGTDTAGNDVAGTVIKATSVGTNKATFEGVNMTGWTVAVGYRYTTTVELPNYYMSVEAGKYDVDADLRISGINFEMGISGPMEFHLSSIYADMNDYVQYESGMKLDDSDFGKPPSKTSKSVRVPVQKKNEKYNLTIKIPDPFSTALISASWDGIYNQRRHARK
Physico‐chemical
properties
protein length:1000 AA
molecular weight: 109309,00530 Da
isoelectric point:4,72914
aromaticity:0,11100
hydropathy:-0,34900

Domains

Domains [InterPro]
IPR058003
TTP
1–177
IPR058003 DC_0058
DC_1891
ATT
1–312
DC_1891
IPR058003
TTP
311–997
IPR058003
ADP00057.1
1 1000
Architecture
ATT
STR
ATT 1-312 | STR 313-1000
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADP00057.1
1 1000
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9639
Central domain 138 359 223 0,8860
C-terminal 360 1000 640 0,2926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-359
C-terminal
360-1000

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage 9515-10a
[NCBI] 		444875 Uroviricota > Caudoviricetes > Autographivirales > Tangaroavirus > Tangaroavirus tv951510a
Host Prochlorococcus marinus str. MIT 9515
[NCBI] 		167542 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADP00057.1 [NCBI]
Genbank nucleotide accession
GU071100 [NCBI]
CDS location
range 29768 -> 32770
strand -
CDS
ATGGCAGCAATTAATCAACGAATCCCAAACTTTTTAGGAGGTGTATCCCAACAGCCCGATACAATTAAATTTCCAGGGCAGCTTAGGGTATGTGATAACGCAGTACCTGATGTAACCTTTGGCTTAATGAAACGTCCTCCAGGAGAATTTGTGAAGACGTTGACTAATGCTAATGCTAGTGGTTATTGGTATGATATACTAAGAGATGGAGATGAAAAATATTTAGTACAAATGACAGCATCATCTAGTTATTCTGGTACTAAACCTATTAGGATTTGGAACCTTTTAACTGGAGTAGAACAGAGTCTTACCAATAGTAATGGTGATTCTTTGTTTCAATATATGCAACAAACAGGTACAACTAAACCATATGCTATTCAATCAGTACAGGATTATACAATCATTACCAACCCGCAAAAAACGATTGGTACGGATGGGAACACTGCTGTTCCTCTCAACAGTGGGGACTACGCTTTTGCTAGGTTAGATACTATTGCTTATAATACTGAGTATGTATTATATACAGGTTCTGCACCGTCTGCTAATACTTATTATCGAGTAACTTCTTTAAAAGTAGATTATACTAATACCCAAGGTGGTAGTGCTGTGGGTAGTACATGGGATGATACTAATGAAGATGGTAGATATGCTGGACAATTAGGTTTTTCGTTTTCAGGAGGTAGTGCTGTAACTATTCCTGGAGGACAGGTAGCCACAGAAGATGTAGAAGGTACATTACTAATTAATGGTCAATCATTTATTACTTCACAAGATCCTCAATATCAAGCTGATGATTCTAGTTCAACATCTACTTCAGGAGATGGATCTGACTTTATTGGTTATGTTTCCGATTATGATACACGATACACAGCTACAGTTACATTAAAAAACGGTGGTATAATTAAAGGTACTAAAGCACAAGCTGAAGCATGTTATATTGATGTTGTTGTAGAAGGTAAATATTACCGTATTTCAGTAGAAGCTGTAGAACCTGTTGAAACATATCAAGGTGTTTCTAGTATTGCATACTACAAAACAGCACAAAGTCCAGATAAAGGTAGAGCTAGTATGGCTACTATCCTTAAAGGATTGGAAACTGCTGTTAATAGCGATTTAGCTAATGTTACTGCTGAAATATATGGTTCAGGTTTATATTTATATGGTAGTGCAGCTCCTAATGTAAACTTTTTAGGAGGTGCTGTGAATGAAGCTATGAACGTGTTTGGTAACACAGCACAAGATGTAGCTCGTTTACCATCTATGTGTAAACATGGTTATATAGTACAAGTAGCTAATTCAGAAAACGTAGATGCTGATAATTATTATGTAAAATTTCTAGCTGATAACGGTTCAGGTGGTTCAGGTAAATGGGAAGAAACTGTAAGACCACATAACTTCTCATCAGGTAGTGACCCTATGGTTAAAGGATTAGATCCTGCTACTATGCCACACGCTTTAGTTAATAACCGTAACGGTACTTTTACTTTTAAAAAGTTAGACGAAACTACAGCTAATGCTGATAATACAGATAATTATTGGAAGTACAGAGAGGTAGGTGATGATGAGACTAACCCATTTCCTAGTTTTAAAGGCTTAGAAATTCAGAAAATATTTTTTCACAGAAACAGATTAGGTTTTGTTGCAAACGAGCAAGTAGTAATGAGTCGTCCTGGAGATTATTTTAATTTCTTTGTTGTCTCTGCGATTACTACAAGTGATGATAATCCTATTGATATTACAGTATCTGATATTAAACCTGCATTTATTAATCATGTCTTGCCTGTTCAAAAAGGTGTGATGATGTTTAGTGATAACGGTCAGTTTATATTATTTACTGAATCTGATATATTTAGTCCTAAAACAGCAAGGCTGAAAAAGATATCTAGCTATGAATGTGATGATGCTTTACAACCTGTAGACATGGGAACTTCAGTTATGTTTAGCTCGTCTGTATCTGCATACACTAGAACGTATGAAGCTACTGTTGTAGACGATGATGTACCTCCAAAAATAGTAGAGCAAACACGAGTAGTTCCTGAATTTTTACCAAAAACTGTTGATACTACAGCTAACACAACCTCTTTAGGTATAGTTAGTTATGGTGAAACAAATACAAACGAGTTGTATCATTATAAATATTTTGATTCAGGAGAACGTAGAGATCAATCTGCATGGTATTCATGGACATTACAAGGTACATTACAGTATATGGTATATACTGCTGGTACTTTCTATGTTGTCACTAAACAAGATAATGATTATATATTATGTAGACATGAATATGTCACAGATGCTACATCTGCTCGAACATATGTTGTTGGTGGAGTAGCTGCTGATGTAGGTTCTCCGTTAAAAACAGCTAGATGGTTTGAAGGTTGTCTAGATAACATGACTATACCAACTGCTATAACTTATACAGCTCAAGGAGGTTCAGTAACAGGACCAGATTTCACTGATTTAACTATACCTTATACTCCAACTTCAGCTGATAATTTATATGCTGTAGCTCTTTCTGGAACAGATACAGCTGGAAATGATGTTGCTGGTACGGTAATTAAAGCTACTTCTGTAGGTACTAATAAAGCCACGTTTGAAGGAGTCAATATGACTGGATGGACAGTAGCTGTAGGTTATAGATATACAACAACAGTAGAGCTACCTAATTACTATATGTCCGTAGAAGCTGGTAAATATGATGTAGATGCTGACTTAAGAATTTCTGGAATAAATTTTGAAATGGGTATTTCTGGTCCTATGGAGTTTCATTTATCTTCTATCTATGCAGATATGAATGATTACGTTCAATATGAATCTGGTATGAAACTAGATGACAGTGACTTTGGTAAACCACCTTCTAAAACATCTAAGTCAGTGAGAGTACCAGTACAGAAAAAGAATGAAAAATATAATCTTACTATAAAAATACCTGATCCTTTTTCCACCGCTTTAATCTCAGCAAGCTGGGATGGCATTTATAACCAACGAAGACATGCACGAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dd3691de72a488589dc89df5a4675483e1f1b91105bd875474cfe6b7a54020b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7146
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9515-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank