Protein

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Genbank accession
YP_009134673.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSKILANQIANYGDNSPVEVKEGVNIPAGKPLQAAGNAGTSGQVLTATPTSIEWATPFDGSYLSLTNTPTIPASQVNADWNASGGSVAAILNKPVVPAQPSVSVINAVGSGNLTYNQANGEFTFTPPDLSGLAANTNVSNWNAAYDWGDHAQAGYAAVANAANWDVAYGWGDHGVAGYLTAESDTLQSVMARGATTSVQIIANAGVRADILGVGGGVGNGDVQLQHNDVSNVSTLQHLNVNGSLEIKSVSGINLKPGSASGNSVDIYHNIDGSTELLRIQTTDTGVDISGNLSVSGTVSGVDIEDLDNVNIAGGLQDQQVLKWEASSSSWKPANDLVGGASGIQFNDLSVVENAVGTAALSYNNTNGVFTYTPPDLTPYLTTETDPVFSAHVSSGILQTNLNQWTAAYGWGDHSTAGYLTSYSETGTLADVTGRGATTSSNLTLGGTVQFNNNSAFANDKVLNFGASSNGRILYVSATNSFDVRVPGGAEDLKLGAGTAVRITNENGLTDRAVFTASGLTVTGNLLYSNNYATTGDLPNATTYHGMFAHVHAEGHGYFAHAGAWTQLLDTGSSLGELADVATTAPSVSDVLTWDGSNWGPAAPTGGGGGANVTISDTAPGSASAGDLWWESDKGRLKIYYNDTDSTQWVDASPPLTNANVPVYVGEVELYQGGNQITWLGSGGITAAIRATEGGGGFQSPCIRVTFAQAFSASDAYTIQATVYNPSTIGHVYQTSIRKTGPQYFDFQVYNLTSSAVATDFKVAITIYAI
Physico‐chemical
properties
protein length:769 AA
molecular weight: 79480,81300 Da
isoelectric point:4,36941
aromaticity:0,08453
hydropathy:-0,11990

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009134673.1
1 769
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,8581
Central domain 205 403 200 0,2256
C-terminal 404 769 365 0,9110
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-769

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage ACG-2014e
[NCBI] 		1493510 Uroviricota > Caudoviricetes > Pantevenvirales > Chalconvirus > Chalconvirus acg2014e
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009134673.1 [NCBI]
Genbank nucleotide accession
NC_026928.1 [NCBI]
CDS location
range 157069 -> 159378
strand +
CDS
ATGTCAAAAATTCTTGCAAACCAAATTGCCAACTACGGGGACAACTCTCCAGTAGAGGTAAAGGAGGGTGTAAATATTCCTGCTGGAAAACCACTACAGGCAGCAGGCAATGCTGGTACTTCTGGTCAAGTCCTTACAGCAACTCCTACTTCTATTGAGTGGGCGACACCTTTTGATGGTAGTTATCTTAGTCTTACTAATACACCTACGATTCCTGCATCACAAGTAAATGCTGATTGGAATGCTAGTGGTGGTAGCGTTGCTGCTATTTTAAATAAACCAGTTGTTCCAGCACAACCTAGTGTTTCTGTAATAAATGCTGTAGGATCTGGTAATCTGACATACAATCAGGCGAATGGAGAATTTACATTTACTCCACCAGATCTTTCTGGTCTTGCTGCTAATACTAATGTATCAAACTGGAATGCAGCATATGACTGGGGCGATCATGCTCAAGCAGGGTATGCTGCTGTAGCAAATGCTGCTAACTGGGATGTGGCATATGGTTGGGGTGATCATGGAGTTGCTGGATATCTCACTGCTGAATCTGATACTTTACAATCAGTAATGGCGCGAGGTGCTACTACTTCTGTTCAAATTATTGCTAATGCTGGTGTTAGAGCTGATATTCTTGGCGTTGGTGGTGGTGTTGGAAATGGTGATGTCCAATTACAACATAATGATGTAAGTAATGTATCAACACTACAACATCTTAATGTTAATGGATCTCTTGAGATTAAAAGTGTTAGTGGTATCAATCTCAAACCAGGAAGTGCATCTGGTAATTCTGTAGATATCTACCATAATATTGATGGGTCTACTGAATTACTAAGAATTCAAACAACAGATACTGGTGTTGATATTTCTGGTAATCTTAGTGTTTCTGGCACAGTAAGTGGTGTTGATATTGAAGATCTAGATAACGTTAATATTGCTGGTGGACTACAAGATCAGCAAGTTCTTAAATGGGAAGCGTCGTCATCATCCTGGAAACCTGCTAATGATTTGGTTGGTGGTGCTAGTGGCATTCAATTTAATGATCTTTCTGTTGTTGAAAATGCTGTAGGAACAGCAGCACTATCTTATAATAATACTAACGGAGTCTTTACATACACACCACCTGATCTTACTCCTTATCTAACAACAGAAACTGATCCTGTTTTCTCTGCTCACGTATCATCTGGTATTCTACAGACAAATCTTAATCAGTGGACGGCAGCATATGGTTGGGGCGATCATTCTACTGCTGGTTATCTAACATCTTATTCTGAAACAGGCACTCTTGCTGATGTAACAGGTAGAGGTGCTACTACTTCTTCTAACCTAACTTTAGGGGGAACTGTACAATTTAATAATAATAGTGCCTTTGCTAATGATAAGGTATTAAACTTTGGTGCTAGTTCTAATGGTCGTATCTTATATGTTTCTGCAACTAATAGTTTTGATGTAAGAGTTCCTGGTGGTGCTGAAGATCTAAAACTTGGTGCTGGTACAGCAGTCAGAATTACGAATGAAAATGGATTAACTGATAGGGCAGTATTTACAGCTTCTGGTCTTACAGTTACTGGTAACTTATTATACTCTAATAACTATGCCACGACTGGAGATCTTCCAAACGCAACTACCTATCATGGTATGTTCGCTCATGTTCATGCTGAAGGTCATGGATACTTCGCACATGCTGGTGCTTGGACGCAACTATTAGACACTGGTTCTTCTCTTGGCGAACTTGCTGATGTTGCTACTACAGCACCAAGTGTGAGTGATGTTTTGACATGGGATGGTTCTAACTGGGGTCCTGCTGCTCCTACTGGTGGAGGTGGTGGTGCTAATGTAACCATCTCAGACACTGCTCCTGGTTCTGCTAGTGCTGGTGATCTTTGGTGGGAGAGTGATAAGGGACGCCTGAAGATTTACTACAATGATACTGATAGCACACAGTGGGTTGATGCTTCACCACCACTAACAAATGCGAATGTGCCTGTATATGTTGGTGAGGTAGAACTTTATCAGGGTGGAAATCAGATTACATGGTTGGGTAGTGGTGGCATAACAGCAGCAATAAGAGCTACTGAAGGTGGTGGTGGATTCCAAAGTCCTTGCATCAGGGTTACTTTCGCACAAGCATTCAGTGCTTCTGATGCTTATACAATACAAGCCACAGTATACAATCCTAGTACAATAGGTCATGTATATCAAACTTCTATTCGTAAAACTGGTCCGCAGTATTTTGATTTCCAGGTATATAATTTGACATCATCTGCTGTTGCAACTGACTTTAAAGTTGCTATTACAATCTATGCAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
504215290ca589b3f43cb93d840bade906653d59ebc3555c49783c0133e5f37c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecological redundancy of diverse viral populations within a natural community Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B. 2015-03-20 — GenBank