Protein

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Genbank accession
YP_009801216.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MNVYSQWFDVLRVGNHYNTMQYFAGTGGDTFEINFSGGYLDKSHVKALADDEGPELTLTFITKSRIKLSRPIMPGSNVLIFRDTPKVVPLAMFSDGAIINSINLDRNAKQAVFVAAEMLDRFDTFGSSLETSVSQVSEALSVANEALNKAIEAERYSKSVLGVAESAKVESAEAFTKAFRAYNVTIGETSYRLKWNGFTLVGSFEDGAVVRSVTDAVVQLETGKVFKYTGTIPPEGLTVTAGDLPSSKWSNLDVYSTAREMREGYAKLEYARRGTFLEGGFRIVAGESAALHSDGLYYSPISGFRDISPGSSPDSGMVCVGTLKGVYVDCLSNWVVGDITMANKAIESKSVRGGGVIRIPVGDFKSAETVQLRDFVQLRGISRRRSRITNHPTFSGNVLVHATKGSLGSSDVPEYLSYSGISQCTVFASGSVKVGVYVRHCTNEADFTKLTTQGFSEVNLYVIGCFYCDFSGSVSRDAMRYGMIFGRKMYSEGGLNEVNACTMNNIRSNYSGVEDKYNPSEDMLNGAGITLWSANACALDYVGAENSFGVGIVIRRGINSTIQTAYLEANGRSAAAVDKIGLAVISADFPQLLISNLMLTRNQRVHLAGGAILNVGNIYSESFESGLILGNGQISLESGLYANRMTPADIAKVINKELNLHGAIGNVGMSSYSTLDSSIMVSGSIVSNIRIVMVPSVTITTTDPIIIGIAGTEIAVNFGNSFTAGVPIEKVISGDVPKGIYRLRHRSNSLPSASTNLTAAFAVGVYCIKGFPLYSVKIGG
Physico‐chemical
properties
protein length:780 AA
molecular weight: 83717,96050 Da
isoelectric point:6,55009
aromaticity:0,08974
hydropathy:0,03628

Domains

Domains [InterPro]
DC_0245
STR
11–754
DC_0245
IPR005604
ATT
27–121
IPR005604
YP_009801216.1
1 780
Architecture
STR
ATT
STR
STR 11-26 | ATT 27-121 | STR 122-754 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009801216.1
1 780
Domain Start End Length (AA) Confidence
N-terminal 1 339 339 0,9964
Central domain 340 655 317 0,9856
C-terminal 656 780 124 0,9826
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-339
Central
340-655
C-terminal
656-780

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 25AhydR2PP
[NCBI] 		2163976 Uroviricota > Caudoviricetes > Autographivirales > Aerosvirus > Aerosvirus av25AhydR2PP
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009801216.1 [NCBI]
Genbank nucleotide accession
NC_047966.1 [NCBI]
CDS location
range 5535 -> 7877
strand -
CDS
ATGAACGTATATTCACAGTGGTTTGATGTTCTTCGAGTGGGTAACCACTACAACACAATGCAGTATTTCGCCGGTACGGGTGGCGACACTTTCGAGATTAACTTCTCTGGTGGATACCTTGACAAGTCCCACGTAAAGGCACTGGCAGACGACGAGGGCCCCGAGCTGACGTTGACTTTCATCACCAAGAGCCGAATCAAACTGTCCCGTCCTATCATGCCGGGCAGCAATGTTCTAATCTTCCGGGACACCCCAAAGGTAGTTCCTCTTGCGATGTTCAGCGACGGTGCAATCATCAACTCCATCAATCTGGACCGCAATGCAAAGCAGGCGGTGTTTGTTGCTGCTGAGATGCTCGACAGGTTTGACACATTCGGCTCCAGCCTTGAGACCTCTGTAAGTCAGGTTTCTGAGGCGCTTTCAGTTGCAAACGAGGCACTTAACAAGGCAATAGAGGCTGAGCGATACTCAAAGAGTGTACTTGGAGTTGCTGAGTCGGCCAAGGTGGAATCTGCTGAAGCATTTACAAAAGCTTTCCGAGCTTACAATGTAACCATTGGAGAGACCAGTTACCGTTTAAAGTGGAACGGGTTCACGCTTGTAGGTAGCTTTGAGGACGGCGCAGTCGTTCGGTCAGTTACCGATGCAGTTGTACAGCTTGAAACTGGTAAGGTATTCAAGTACACTGGTACAATACCACCTGAAGGTTTAACTGTAACTGCTGGGGACCTTCCGAGCAGCAAGTGGAGCAACCTAGACGTATACTCAACCGCACGAGAGATGCGGGAAGGTTATGCCAAGCTGGAGTATGCTCGACGAGGTACATTCTTAGAGGGTGGTTTCCGTATAGTTGCCGGTGAGTCAGCGGCGCTTCATTCAGACGGGCTGTACTACTCGCCAATATCCGGCTTCCGTGATATATCTCCGGGTAGCTCCCCAGATTCAGGTATGGTGTGTGTCGGCACTTTAAAGGGCGTATATGTAGACTGCCTGTCAAACTGGGTTGTTGGAGATATAACCATGGCAAATAAGGCCATAGAAAGCAAGAGTGTCCGGGGGGGTGGGGTTATACGAATCCCTGTAGGTGACTTTAAGAGCGCAGAGACGGTACAGCTACGAGATTTCGTACAGCTTAGAGGGATATCTCGCCGCCGCTCGCGCATAACAAATCACCCAACATTCTCAGGAAACGTTCTAGTTCACGCCACTAAAGGGTCCTTGGGCTCTTCTGATGTACCGGAATACCTGTCCTACTCCGGCATAAGCCAGTGCACGGTATTTGCATCTGGGAGTGTTAAAGTAGGTGTGTATGTCAGACACTGTACAAACGAGGCGGACTTCACTAAACTTACCACTCAGGGATTCTCTGAAGTTAACCTGTACGTCATAGGGTGCTTCTATTGCGACTTCTCAGGTTCTGTTTCCCGGGACGCAATGAGATACGGGATGATATTCGGTCGCAAGATGTACTCCGAAGGTGGCCTGAACGAGGTTAACGCATGTACAATGAATAACATCCGGTCCAACTACTCCGGTGTTGAGGATAAGTACAATCCGTCTGAAGACATGCTTAATGGAGCAGGTATAACACTGTGGAGTGCAAACGCATGTGCTCTGGACTACGTAGGGGCTGAAAACTCATTCGGTGTAGGTATAGTTATACGGAGGGGTATTAACAGTACAATCCAGACTGCGTATCTGGAGGCCAACGGAAGGAGCGCAGCAGCAGTTGATAAGATAGGACTTGCAGTTATCAGCGCAGACTTCCCGCAGCTACTGATATCCAACCTGATGCTAACAAGAAACCAAAGGGTGCATCTAGCCGGCGGTGCAATACTGAACGTAGGTAACATATACTCCGAGTCCTTTGAATCTGGGTTGATTCTAGGGAATGGCCAGATTTCTCTGGAGTCTGGCCTATATGCAAACCGTATGACTCCAGCCGACATAGCCAAGGTAATAAACAAGGAGCTGAATCTTCACGGAGCAATCGGGAATGTAGGCATGTCCAGCTACTCCACACTGGATAGCTCTATAATGGTATCCGGCTCAATTGTGTCGAATATCAGGATTGTTATGGTCCCGTCTGTTACAATTACAACTACAGACCCTATCATAATTGGGATTGCAGGTACGGAGATAGCTGTAAACTTTGGTAATTCCTTTACGGCAGGTGTTCCGATTGAGAAAGTTATAAGCGGGGATGTTCCAAAGGGGATATACCGACTGCGGCACAGGTCAAATTCCCTGCCGTCTGCAAGTACTAACCTAACAGCCGCATTTGCTGTTGGTGTGTATTGTATAAAGGGTTTCCCGCTGTACAGTGTAAAGATAGGAGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
c0ff989d20f3456134b9f29f70fbb98396ad9a8bf563ea571a39b7aa3db640f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6881
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture Kolsut,J., Wojcik,E., Wojtasik,A. and Dastych,J. 2005-10-01 — GenBank