Protein

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Genbank accession
WYD65301.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MALPNGSQVFIEQTRSATEIEATAVSNAENPVATVASTTGIVAGDYVLVLESVWASFKNRVMRVKEVTLNTSLTLEGDKNTSTADTNKFPAGGASTLVKIESWIEIPCVSDIAKSGGEQQFYTKQCLSDDREKQIPTFKSATSIAYTFDFDYANPITQLLIGYDEDGKTRAMRMFVPKASYPIRTFSGTPSFDDIPNTVMNEDETTILTISLDGKYTHMKEFVV
Physico‐chemical
properties
protein length:224 AA
molecular weight: 24586,38630 Da
isoelectric point:4,69777
aromaticity:0,08929
hydropathy:-0,21161

Domains

Domains [InterPro]
DC_0037
ATT
1–51
DC_0037 IPR014918
WYD65301.1
1 224
Architecture
ATT
TAS
ATT 1-51 | TAS 52-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD65301.1
1 224
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,5441
Central domain 220 219 1 0,3090
C-terminal 220 224 4 0,8742
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-219
C-terminal
220-224

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ETEP102
[NCBI] 		3117680 Uroviricota > Caudoviricetes >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD65301.1 [NCBI]
Genbank nucleotide accession
OR979723 [NCBI]
CDS location
range 17261 -> 17935
strand +
CDS
ATGGCACTTCCTAACGGTTCCCAAGTTTTTATTGAGCAGACCCGATCCGCTACCGAGATTGAAGCTACGGCAGTTAGCAACGCAGAAAACCCTGTAGCGACAGTGGCATCAACTACTGGCATTGTTGCTGGTGATTATGTTCTGGTTCTTGAAAGCGTGTGGGCTTCGTTCAAAAACCGAGTTATGCGAGTAAAAGAAGTAACCCTGAATACATCTCTGACTCTCGAAGGTGACAAGAATACCTCGACGGCGGACACTAACAAGTTCCCAGCTGGCGGCGCGTCAACTCTGGTTAAGATCGAAAGCTGGATTGAGATCCCATGCGTGAGCGATATTGCAAAATCTGGTGGCGAGCAGCAGTTCTACACCAAGCAGTGTCTATCTGATGACCGTGAAAAGCAGATCCCGACCTTTAAGTCTGCGACTTCCATCGCGTATACTTTCGACTTCGACTACGCGAACCCGATCACTCAGCTACTGATTGGTTACGACGAAGACGGCAAGACCCGCGCTATGCGAATGTTTGTTCCGAAGGCAAGCTATCCGATCCGCACATTCTCTGGCACGCCATCTTTCGATGACATCCCCAATACGGTCATGAACGAAGATGAAACGACCATCCTGACCATCTCACTTGATGGTAAATATACTCACATGAAAGAGTTTGTGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e5340274c199cd7bcd2b1b05de1ff08bafff1e3f54a46a6a6013364752e71b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9288
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Determinants of phage host range in porcine enterotoxigenic Escherichia coli Gambino,M. and Broensted,L. 2024-07-24 — GenBank