Protein

View in Explore
Genbank accession
WCZ57477.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITKIILQQMVTMDQNSITASKYPKYTVVLSNSISSITAGELTAAIESSKASAAAAKQSEINAKQSELNAKDSENEAEISAASSQQSATQSASSATASANSAKAAKTSETNAKASETAAKTSETNAKASETAAKTSETNANSSKTAAAASASAAKTSETNAAVSASAAKTSETNANSSKTAAASSASAAKASETNAKTSETNAAASATKAESVASGMRDSIGLGNAPRNCPDISGNPSAYIGFMRIMSTAVGFPSIASGESSLTGFISQVDGSPAYTGVFQGWASRSLYTYRWASNIGPQWTRHARKNEVDRLVQLSSETHLLNPGDNAKIIITSNKLWGAYDIENRTYIPLAVGQGGTGGRSAAEARTNLQLNRFQRSSDTRTIVCSTDVQKDGCYLQIDADGQWGAFNPTTGKWQPLAIAQGGTGALNTSDARRNLEVMYRRFSTLTDQNLNDLTGESTGFYYQGLSANATTARNYPIQEAGNLMVLQNGANGVAGCCQIYITFSTNRIYERSYNPGTSTWSAWGSILNSYDPSYCRQLIELGSQHAPLFAGLALTGYSDSTVAAGGIINSYLRATDGTQRVRMRLYPEKLADGVAAATLQVMGEDTGPSYKTFHFKHNGQLYVPNEINTETIAVRNLTVTQRNLGIPTTGFMGDYQTINAPAGAVDGKYYPVIIYTGGTNGYGTTPVPIFVRTPGRSASHEMNNNVFSGYVTCGGWSDSPTMAHGMFTTYDPNELGILCIKGSNKDYAQHIAVYVHYKAFPVNIMTDPKVEIIVPTEDYVLGTNGVKFKFGVTDAGDGNTEGNVKNILNFTGGGSGYYSTHPFRQGLSNNFALTNNLSTGDAFSATAPSFTFNGSVVGANSYSARGDAVTKNTYTSQLVNSADNIVGQSEFRATEEAGQIIVRDMSSSASHKFFNFNKDGTFSAPSGILSSTGIDWNTQHNTINKFYGVAGQVNTPENNVVFGGIHVGFSGNYATQLAGRGSRYYLRSIESGTIGAWNRIITDQYADFKTQIFANKNGEAITIKSTVNDNSESGYIAGRNNTNTRLWYVGKSGPQETVVIRNDMNGNQILLRDGAGDISLDTKDGNKVVYANASNFRLVNSNGKYTRLVTSGTSTHAISLDNWGSTTRPTVFECKYENPSTSANVSWIFYGQVNTDGSRVFQVNGAVNCVTLNQSSDRDLKDNIKPIKDATNALRKMNGYTYTLKEDGLPYAGVIAQEVMEALPEAVSGFTKYTDLEGPTLTGEQLVGEERFYSVDYGAITGLLVQVSRESDSRITALESEVSDLKKQIADLTLVVNSLLANKAQ
Physico‐chemical
properties
protein length:1309 AA
molecular weight: 139587,55330 Da
isoelectric point:6,34422
aromaticity:0,08403
hydropathy:-0,36921

Domains

Domains [InterPro]
DC_0608
ATT
2–178
DC_0608 DC_1205 cd19958 DC_0421
Coil
Unmapped
57–77
Coil DC_0268 DC_1909 G3DSA:6.20.80.10 IPR030392
IPR030392
CHP
1180–1231
IPR030392 Coil
WCZ57477.1
1 1309
Architecture
ATT
STR
STR
ATT 2-316 | STR 317-624 | STR 741-1309
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57477.1
1 1309
Domain Start End Length (AA) Confidence
N-terminal 1 374 374 0,6401
Central domain 375 573 200 0,2228
C-terminal 574 1309 735 0,7502
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-374
Central
375-573
C-terminal
574-1309

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K20
[NCBI] 		3027609 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57477.1 [NCBI]
Genbank nucleotide accession
OQ291032.1 [NCBI]
CDS location
range 77591 -> 81520
strand -
CDS
ATGGCTATAACTAAAATAATTTTACAGCAAATGGTCACTATGGATCAGAATAGCATAACTGCAAGCAAATATCCTAAGTATACAGTTGTGCTTTCTAATTCTATTAGCTCTATTACAGCAGGAGAACTAACTGCTGCTATAGAATCCTCCAAAGCTTCTGCTGCAGCAGCTAAGCAATCAGAGATTAATGCTAAACAGTCGGAGCTAAATGCCAAAGATTCTGAGAATGAAGCAGAAATTTCTGCGGCATCTTCCCAGCAGTCTGCAACTCAGTCTGCTTCTTCTGCTACTGCTTCTGCTAATAGTGCTAAAGCTGCTAAGACTTCTGAGACCAATGCAAAAGCTAGCGAGACAGCTGCAAAAACTTCAGAAACTAACGCAAAAGCTAGTGAAACCGCAGCTAAAACTTCTGAGACTAATGCTAATAGTAGCAAAACTGCTGCGGCTGCTTCTGCATCAGCTGCTAAAACTTCAGAAACTAATGCTGCTGTATCTGCTTCTGCCGCTAAAACTTCTGAGACTAACGCTAATAGTAGTAAAACTGCTGCTGCTAGCAGTGCTAGTGCTGCTAAGGCCTCGGAAACTAATGCTAAAACATCAGAAACTAATGCGGCTGCCTCAGCTACTAAAGCCGAAAGTGTAGCTTCTGGTATGCGTGATTCTATAGGTTTAGGTAATGCCCCTCGTAATTGTCCTGATATTTCTGGTAATCCTTCTGCGTATATTGGCTTTATGCGTATCATGAGTACTGCGGTAGGCTTTCCATCAATAGCCTCTGGAGAGAGTAGTCTTACAGGATTTATTAGTCAAGTGGATGGCAGTCCAGCGTACACTGGTGTTTTCCAGGGATGGGCGTCTCGCTCATTATATACATATCGTTGGGCAAGCAACATAGGCCCACAGTGGACACGTCATGCTCGTAAGAATGAGGTTGATAGGCTCGTCCAACTAAGTTCTGAGACCCACCTATTAAACCCGGGTGATAATGCTAAAATAATTATTACTTCCAATAAACTCTGGGGAGCTTATGATATAGAGAATAGGACATACATACCTCTTGCAGTAGGACAGGGAGGTACCGGGGGTAGATCAGCTGCTGAAGCAAGAACTAATCTACAGCTAAACCGCTTCCAACGTTCCAGTGATACAAGAACCATCGTTTGTTCAACAGATGTTCAGAAGGACGGCTGTTACTTACAGATTGATGCTGACGGTCAGTGGGGAGCATTTAATCCTACAACTGGTAAATGGCAACCTCTCGCAATAGCTCAGGGTGGCACTGGTGCTCTTAATACTTCTGACGCACGTAGAAATCTGGAAGTAATGTATCGTAGATTTTCTACCTTAACAGACCAAAACTTGAATGATCTTACGGGTGAGTCTACAGGTTTCTACTACCAGGGTCTATCTGCTAATGCAACTACAGCCCGTAATTATCCTATTCAAGAAGCGGGAAACTTAATGGTACTACAAAATGGTGCTAATGGGGTTGCTGGATGTTGTCAAATATACATTACCTTTAGTACTAATAGGATATACGAACGTAGTTATAACCCAGGTACCTCAACATGGTCTGCCTGGGGATCTATCCTTAATAGTTATGATCCTAGCTACTGTAGACAGCTTATTGAGCTAGGTTCCCAGCATGCACCATTATTTGCCGGTCTAGCATTAACTGGATATAGTGATAGTACGGTAGCTGCTGGAGGTATTATTAATAGCTATCTAAGAGCTACAGATGGTACTCAAAGGGTACGTATGCGCTTATACCCCGAGAAACTTGCTGATGGGGTTGCAGCTGCAACGCTACAGGTTATGGGGGAAGATACTGGTCCATCTTATAAAACATTCCATTTTAAACACAATGGCCAATTATACGTACCAAATGAGATAAATACGGAGACTATAGCTGTTAGGAATCTTACTGTAACCCAACGAAATTTAGGTATACCTACTACTGGATTTATGGGCGATTACCAGACTATCAATGCACCCGCAGGTGCTGTAGATGGAAAATATTACCCAGTTATAATCTACACTGGAGGTACCAATGGTTATGGTACTACGCCTGTACCTATATTTGTGCGTACTCCGGGTAGATCTGCGTCCCATGAGATGAACAATAATGTTTTCTCTGGATATGTAACTTGTGGGGGTTGGAGTGATAGTCCCACTATGGCACACGGCATGTTTACAACATACGATCCTAATGAACTAGGGATCTTATGTATAAAGGGTAGTAACAAAGACTACGCCCAGCATATAGCAGTGTATGTACACTATAAGGCATTCCCTGTAAATATTATGACAGACCCTAAGGTTGAGATAATTGTTCCAACCGAGGATTATGTATTAGGTACTAACGGTGTTAAATTTAAGTTTGGGGTAACAGATGCGGGTGATGGGAACACAGAAGGTAATGTGAAGAATATTCTGAACTTTACTGGTGGTGGTTCTGGTTACTACTCTACCCATCCTTTCCGCCAGGGATTATCTAATAATTTTGCCCTAACTAATAACCTTAGTACTGGAGATGCTTTTTCTGCTACTGCACCTTCTTTTACTTTTAATGGTAGTGTTGTCGGTGCTAATAGCTATTCTGCTAGAGGTGATGCTGTAACAAAAAATACGTATACATCTCAACTGGTAAATAGTGCCGATAACATAGTAGGACAGAGTGAGTTTAGGGCAACCGAAGAAGCAGGACAAATTATTGTTAGAGATATGAGTAGTTCTGCTAGCCATAAATTCTTTAACTTCAATAAGGATGGAACCTTTTCAGCTCCTTCTGGTATTTTATCTTCTACTGGTATAGACTGGAATACCCAACATAATACTATCAATAAATTTTATGGTGTTGCGGGTCAAGTTAATACTCCTGAAAATAATGTTGTTTTTGGTGGTATCCATGTAGGGTTTAGCGGTAATTATGCTACTCAATTAGCCGGTAGGGGTAGTAGATATTACCTGAGAAGTATTGAATCTGGCACTATAGGTGCATGGAATCGTATAATTACGGATCAGTATGCAGATTTTAAAACACAAATTTTTGCTAACAAAAATGGCGAAGCTATAACCATTAAATCGACAGTGAATGACAACTCGGAATCTGGATATATCGCTGGTAGAAATAATACCAATACCCGTTTATGGTACGTAGGAAAATCCGGTCCTCAAGAAACTGTGGTTATCCGTAACGATATGAACGGAAACCAAATACTGTTAAGGGATGGTGCTGGCGATATAAGCTTGGATACAAAGGACGGGAACAAGGTTGTATACGCAAACGCGTCGAACTTTAGGCTTGTTAATAGTAACGGAAAGTATACAAGATTAGTAACATCCGGAACTTCAACTCATGCAATTAGCCTGGATAATTGGGGTTCAACCACAAGACCAACTGTATTTGAATGTAAGTACGAAAATCCTTCTACTTCTGCTAACGTTAGTTGGATATTCTATGGTCAAGTAAATACCGATGGATCTAGAGTATTTCAAGTTAATGGTGCTGTTAACTGTGTAACTTTAAATCAAAGTTCCGACCGTGATCTTAAAGACAATATTAAACCAATCAAAGACGCAACAAATGCTTTGCGGAAAATGAATGGTTATACATATACACTTAAAGAAGACGGCTTACCTTATGCGGGTGTTATTGCTCAGGAAGTGATGGAGGCTCTACCTGAAGCTGTAAGTGGATTTACAAAATATACAGATCTTGAAGGACCTACCCTTACTGGAGAACAATTAGTTGGTGAAGAAAGATTCTACTCAGTAGACTATGGAGCAATTACCGGGTTATTAGTACAGGTAAGTAGGGAATCTGATAGTAGGATCACAGCTCTAGAATCAGAAGTATCTGATCTTAAAAAGCAAATTGCAGACCTAACGTTAGTAGTTAATTCTCTGCTAGCAAATAAGGCACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7131c6f957e6b4a4d9c8949ae0c8715ef1f0529dc9431df0bc3a6c0048a3d01d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K20 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank