Protein

View in Explore
Genbank accession
AUR97676.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLDNAINSINASAAKAENTATFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTAAESDINQAVADAEQSATDAQDAADSIGRYQGLWPDSGGSADKGDTYQTQVSGTPTGQYFTALQNTTVDPVSDDVNWREVVSGSSIGLQEVTATDSTTPRTLEERFTDILNVRDNGGGENPSNSGWEDSPALVKSKNTSNNTLTDDEVNFGSKSLKVWKKASGIKDSAVAASFSLGDETEPKTQVTGVNAPSELANYSNRDCVAVFAQNLSRPARFTTSDTTFTATSVIIPSLPDDLYEGMLIDVNQGGSPWYTARIESVSGNTITVLAWYEVGTANQGTPSDGEEIKVDSFTKIWAHNANIEIKTDGEANSGTGFELGLLCQKTGSGASTGGFDVAVLDGEEPLYGFRARGTAGHTLKNGFLASDNARISYASENAEIGQLIDNPTQSAVLVRKNGNARFRVDEQGRQSGTYYPIQLASTSSTIGINSVYTVATATGITITLPSAASVGSGKVMYIVNKSGGDITVSESAINILSDGLTRKLISDGNSWIRITGE
Physico‐chemical
properties
protein length:558 AA
molecular weight: 58931,45420 Da
isoelectric point:4,38049
aromaticity:0,06631
hydropathy:-0,40753

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil
DC_0090
STR
1–558
DC_0090
AUR97676.1
1 558
Architecture
STR
STR 1-558
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.243.O._10N.261.54.B5
[NCBI] 		1881266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR97676.1 [NCBI]
Genbank nucleotide accession
MG592608.1 [NCBI]
CDS location
range 30982 -> 32658
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGCTAAGGCAGAAAACACCGCTACCTTCCTGGATGATATGTCGACGTTTGACGATCAATCGAGCGTAACTAACCCAAACAACGGGCAAACTGTTGCGTCCATCCCTAAGCAGGTAAAAGATCGCACAGATGAGCTATTCACCGCTGCTGAGTCGGATATCAATCAAGCAGTAGCTGACGCAGAACAAAGCGCAACAGACGCGCAAGATGCTGCGGATAGCATTGGACGCTATCAAGGATTATGGCCGGACTCTGGCGGAAGCGCTGACAAAGGTGATACATATCAAACCCAAGTTAGTGGCACCCCAACAGGTCAATATTTTACAGCGCTGCAAAATACAACAGTCGATCCGGTTAGTGATGATGTCAATTGGCGTGAGGTTGTTAGTGGGAGCAGTATCGGACTGCAAGAAGTTACAGCGACAGACTCTACAACACCGAGAACGCTTGAAGAAAGGTTTACGGACATTCTCAATGTTAGGGATAACGGGGGCGGTGAAAACCCAAGCAACTCAGGTTGGGAGGATTCACCGGCGCTAGTTAAATCAAAAAACACCAGTAACAACACCCTTACTGATGATGAAGTAAATTTCGGGTCGAAGTCTTTAAAAGTATGGAAAAAGGCAAGTGGAATCAAGGACTCTGCCGTAGCTGCTTCTTTCTCTCTCGGTGATGAAACCGAGCCAAAAACTCAAGTCACAGGGGTAAATGCTCCTTCCGAACTTGCTAACTATAGTAATAGGGATTGTGTTGCTGTTTTTGCTCAAAACCTATCTAGACCAGCAAGATTTACAACATCAGACACGACTTTTACAGCGACATCGGTAATCATCCCAAGCCTTCCAGATGACCTATACGAGGGTATGTTAATTGATGTAAATCAAGGAGGGTCGCCTTGGTACACCGCAAGAATAGAATCCGTTTCAGGAAATACAATCACTGTGCTGGCTTGGTATGAAGTAGGCACAGCTAATCAGGGCACCCCATCAGATGGGGAAGAGATAAAGGTAGATTCGTTCACAAAAATATGGGCGCACAATGCCAACATAGAGATAAAAACCGACGGAGAGGCCAACAGCGGAACCGGCTTTGAGTTGGGATTGCTGTGTCAAAAGACCGGTAGCGGGGCGAGCACCGGAGGATTCGACGTTGCAGTCCTTGATGGGGAAGAGCCTCTTTATGGTTTTAGAGCGAGAGGAACGGCAGGACATACACTTAAAAATGGGTTCTTAGCATCCGATAATGCTAGAATTTCTTACGCTTCCGAGAATGCCGAAATTGGACAGCTAATCGATAATCCTACACAGTCAGCGGTATTGGTTAGAAAAAATGGTAATGCAAGATTTCGCGTTGATGAGCAAGGTAGACAGTCTGGAACCTACTACCCTATTCAGTTAGCCTCGACATCTAGCACGATTGGTATTAATTCCGTTTACACTGTAGCGACCGCAACGGGGATAACCATAACCTTACCAAGCGCTGCATCAGTTGGCTCTGGAAAGGTTATGTATATCGTTAATAAAAGCGGCGGTGACATTACAGTTTCTGAATCGGCAATAAATATACTTTCAGATGGGCTAACTAGAAAATTAATATCAGACGGCAATAGCTGGATAAGGATTACTGGTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a71bd7bb9edda5beaf3e1324c453271835b8d74d193bcd6dcff1ca9897da7462
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6924
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank